Gene : Tp57577_TGAC_v2_gene2018 T. pratense v2
Defline:  (1 of 3) PTHR19305 - SYNAPTOSOMAL ASSOCIATED PROTEIN Genomic Order:  417
Name:  ? Tp57577_TGAC_v2_gene2018 Secondary Identifier:  ? PAC:35984514
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2018 0.5kb upstream 0.5kb upstream 3762 true Tp57577_TGAC_v2_LG5: 4245722-4249483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 4245722-4246221 Trifolium pratense
Tp57577_TGAC_v2_gene2018 0.5kb downstream 0.5kb downstream 3762 true Tp57577_TGAC_v2_LG5: 4246222-4249983 Trifolium pratense
Tp57577_TGAC_v2_gene2018 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 4249484-4249983 Trifolium pratense
Tp57577_TGAC_v2_gene2018 1.0kb upstream 1.0kb upstream 4262 true Tp57577_TGAC_v2_LG5: 4245222-4249483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 4245222-4246221 Trifolium pratense
Tp57577_TGAC_v2_gene2018 1.0kb downstream 1.0kb downstream 4262 true Tp57577_TGAC_v2_LG5: 4246222-4250483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 4249484-4250483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 2.0kb upstream 2.0kb upstream 5262 true Tp57577_TGAC_v2_LG5: 4244222-4249483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 4244222-4246221 Trifolium pratense
Tp57577_TGAC_v2_gene2018 2.0kb downstream 2.0kb downstream 5262 true Tp57577_TGAC_v2_LG5: 4246222-4251483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 4249484-4251483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 5.0kb upstream 5.0kb upstream 8262 true Tp57577_TGAC_v2_LG5: 4241222-4249483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 4241222-4246221 Trifolium pratense
Tp57577_TGAC_v2_gene2018 5.0kb downstream 5.0kb downstream 8262 true Tp57577_TGAC_v2_LG5: 4246222-4254483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 4249484-4254483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 10.0kb upstream 10.0kb upstream 13262 true Tp57577_TGAC_v2_LG5: 4236222-4249483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 4236222-4246221 Trifolium pratense
Tp57577_TGAC_v2_gene2018 10.0kb downstream 10.0kb downstream 13262 true Tp57577_TGAC_v2_LG5: 4246222-4259483 Trifolium pratense
Tp57577_TGAC_v2_gene2018 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 4249484-4259483 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300363 5265 Fabidae View MSA
124069233 5270 Rosid View MSA
123745951 5271 Pentapetalae View MSA
122796965 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain