Gene : Tp57577_TGAC_v2_gene2020 T. pratense v2
Defline:  (1 of 2) K04773 - protease IV [EC:3.4.21.-] (sppA) Genomic Order:  372
Name:  ? Tp57577_TGAC_v2_gene2020 Secondary Identifier:  ? PAC:35983604
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2020 0.5kb upstream 0.5kb upstream 7814 true Tp57577_TGAC_v2_LG5: 3874471-3882284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 3874471-3874970 Trifolium pratense
Tp57577_TGAC_v2_gene2020 0.5kb downstream 0.5kb downstream 7814 true Tp57577_TGAC_v2_LG5: 3874971-3882784 Trifolium pratense
Tp57577_TGAC_v2_gene2020 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 3882285-3882784 Trifolium pratense
Tp57577_TGAC_v2_gene2020 1.0kb upstream 1.0kb upstream 8314 true Tp57577_TGAC_v2_LG5: 3873971-3882284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 3873971-3874970 Trifolium pratense
Tp57577_TGAC_v2_gene2020 1.0kb downstream 1.0kb downstream 8314 true Tp57577_TGAC_v2_LG5: 3874971-3883284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 3882285-3883284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 2.0kb upstream 2.0kb upstream 9314 true Tp57577_TGAC_v2_LG5: 3872971-3882284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 3872971-3874970 Trifolium pratense
Tp57577_TGAC_v2_gene2020 2.0kb downstream 2.0kb downstream 9314 true Tp57577_TGAC_v2_LG5: 3874971-3884284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 3882285-3884284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 5.0kb upstream 5.0kb upstream 12314 true Tp57577_TGAC_v2_LG5: 3869971-3882284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 3869971-3874970 Trifolium pratense
Tp57577_TGAC_v2_gene2020 5.0kb downstream 5.0kb downstream 12314 true Tp57577_TGAC_v2_LG5: 3874971-3887284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 3882285-3887284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 10.0kb upstream 10.0kb upstream 17314 true Tp57577_TGAC_v2_LG5: 3864971-3882284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 3864971-3874970 Trifolium pratense
Tp57577_TGAC_v2_gene2020 10.0kb downstream 10.0kb downstream 17314 true Tp57577_TGAC_v2_LG5: 3874971-3892284 Trifolium pratense
Tp57577_TGAC_v2_gene2020 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 3882285-3892284 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297022 5265 Fabidae View MSA
124067655 5270 Rosid View MSA
123738820 5271 Pentapetalae View MSA
122785684 5272 Eudicot View MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain