Gene : Tp57577_TGAC_v2_gene26132 T. pratense v2
Defline:  (1 of 1) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase Genomic Order:  532
Name:  ? Tp57577_TGAC_v2_gene26132 Secondary Identifier:  ? PAC:35984565
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-2541 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26132 0.5kb upstream 0.5kb upstream 4070 true Tp57577_TGAC_v2_LG5: 5577052-5581121 Trifolium pratense
Tp57577_TGAC_v2_gene26132 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 5580622-5581121 Trifolium pratense
Tp57577_TGAC_v2_gene26132 0.5kb downstream 0.5kb downstream 4070 true Tp57577_TGAC_v2_LG5: 5576552-5580621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 5576552-5577051 Trifolium pratense
Tp57577_TGAC_v2_gene26132 1.0kb upstream 1.0kb upstream 4570 true Tp57577_TGAC_v2_LG5: 5577052-5581621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 5580622-5581621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 1.0kb downstream 1.0kb downstream 4570 true Tp57577_TGAC_v2_LG5: 5576052-5580621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 5576052-5577051 Trifolium pratense
Tp57577_TGAC_v2_gene26132 2.0kb upstream 2.0kb upstream 5570 true Tp57577_TGAC_v2_LG5: 5577052-5582621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 5580622-5582621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 2.0kb downstream 2.0kb downstream 5570 true Tp57577_TGAC_v2_LG5: 5575052-5580621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 5575052-5577051 Trifolium pratense
Tp57577_TGAC_v2_gene26132 5.0kb upstream 5.0kb upstream 8570 true Tp57577_TGAC_v2_LG5: 5577052-5585621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 5580622-5585621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 5.0kb downstream 5.0kb downstream 8570 true Tp57577_TGAC_v2_LG5: 5572052-5580621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 5572052-5577051 Trifolium pratense
Tp57577_TGAC_v2_gene26132 10.0kb upstream 10.0kb upstream 13570 true Tp57577_TGAC_v2_LG5: 5577052-5590621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 5580622-5590621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 10.0kb downstream 10.0kb downstream 13570 true Tp57577_TGAC_v2_LG5: 5567052-5580621 Trifolium pratense
Tp57577_TGAC_v2_gene26132 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 5567052-5577051 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300790 5265 Fabidae View MSA
124063919 5270 Rosid View MSA
123740858 5271 Pentapetalae View MSA
122788085 5272 Eudicot View MSA
122046906 5273 Angiosperm View MSA
121345110 5274 Embryophyte View MSA
123424971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain