Gene : Tp57577_TGAC_v2_gene25269 T. pratense v2
Defline:  (1 of 5) PTHR31642:SF6 - HXXXD-TYPE ACYL-TRANSFERASE-RELATED Genomic Order:  1448
Name:  ? Tp57577_TGAC_v2_gene25269 Secondary Identifier:  ? PAC:35984341
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-4203 Trifolium pratense pathologic  
Tpratense PWY-5835 Trifolium pratense pathologic  
Tpratense PWY-6801 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25269 0.5kb upstream 0.5kb upstream 3770 true Tp57577_TGAC_v2_LG5: 14079412-14083181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 14079412-14079911 Trifolium pratense
Tp57577_TGAC_v2_gene25269 0.5kb downstream 0.5kb downstream 3770 true Tp57577_TGAC_v2_LG5: 14079912-14083681 Trifolium pratense
Tp57577_TGAC_v2_gene25269 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 14083182-14083681 Trifolium pratense
Tp57577_TGAC_v2_gene25269 1.0kb upstream 1.0kb upstream 4270 true Tp57577_TGAC_v2_LG5: 14078912-14083181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 14078912-14079911 Trifolium pratense
Tp57577_TGAC_v2_gene25269 1.0kb downstream 1.0kb downstream 4270 true Tp57577_TGAC_v2_LG5: 14079912-14084181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 14083182-14084181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 2.0kb upstream 2.0kb upstream 5270 true Tp57577_TGAC_v2_LG5: 14077912-14083181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 14077912-14079911 Trifolium pratense
Tp57577_TGAC_v2_gene25269 2.0kb downstream 2.0kb downstream 5270 true Tp57577_TGAC_v2_LG5: 14079912-14085181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 14083182-14085181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 5.0kb upstream 5.0kb upstream 8270 true Tp57577_TGAC_v2_LG5: 14074912-14083181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 14074912-14079911 Trifolium pratense
Tp57577_TGAC_v2_gene25269 5.0kb downstream 5.0kb downstream 8270 true Tp57577_TGAC_v2_LG5: 14079912-14088181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 14083182-14088181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 10.0kb upstream 10.0kb upstream 13270 true Tp57577_TGAC_v2_LG5: 14069912-14083181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 14069912-14079911 Trifolium pratense
Tp57577_TGAC_v2_gene25269 10.0kb downstream 10.0kb downstream 13270 true Tp57577_TGAC_v2_LG5: 14079912-14093181 Trifolium pratense
Tp57577_TGAC_v2_gene25269 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 14083182-14093181 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314012 5265 Fabidae View MSA
124064469 5270 Rosid View MSA
123743346 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain