Gene : Tp57577_TGAC_v2_gene25260 T. pratense v2
Defline:  (1 of 2) PTHR10509:SF17 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Genomic Order:  1427
Name:  ? Tp57577_TGAC_v2_gene25260 Secondary Identifier:  ? PAC:35984573
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7076 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25260 0.5kb upstream 0.5kb upstream 1750 true Tp57577_TGAC_v2_LG5: 13796522-13798271 Trifolium pratense
Tp57577_TGAC_v2_gene25260 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 13797772-13798271 Trifolium pratense
Tp57577_TGAC_v2_gene25260 0.5kb downstream 0.5kb downstream 1750 true Tp57577_TGAC_v2_LG5: 13796022-13797771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 13796022-13796521 Trifolium pratense
Tp57577_TGAC_v2_gene25260 1.0kb upstream 1.0kb upstream 2250 true Tp57577_TGAC_v2_LG5: 13796522-13798771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 13797772-13798771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 1.0kb downstream 1.0kb downstream 2250 true Tp57577_TGAC_v2_LG5: 13795522-13797771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 13795522-13796521 Trifolium pratense
Tp57577_TGAC_v2_gene25260 2.0kb upstream 2.0kb upstream 3250 true Tp57577_TGAC_v2_LG5: 13796522-13799771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 13797772-13799771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 2.0kb downstream 2.0kb downstream 3250 true Tp57577_TGAC_v2_LG5: 13794522-13797771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 13794522-13796521 Trifolium pratense
Tp57577_TGAC_v2_gene25260 5.0kb upstream 5.0kb upstream 6250 true Tp57577_TGAC_v2_LG5: 13796522-13802771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 13797772-13802771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 5.0kb downstream 5.0kb downstream 6250 true Tp57577_TGAC_v2_LG5: 13791522-13797771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 13791522-13796521 Trifolium pratense
Tp57577_TGAC_v2_gene25260 10.0kb upstream 10.0kb upstream 11250 true Tp57577_TGAC_v2_LG5: 13796522-13807771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 13797772-13807771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 10.0kb downstream 10.0kb downstream 11250 true Tp57577_TGAC_v2_LG5: 13786522-13797771 Trifolium pratense
Tp57577_TGAC_v2_gene25260 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 13786522-13796521 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303731 5265 Fabidae View MSA
124060400 5270 Rosid View MSA
123737466 5271 Pentapetalae View MSA
122769892 5272 Eudicot View MSA
122044959 5273 Angiosperm View MSA
121347042 5274 Embryophyte View MSA
123380486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain