Gene : Tp57577_TGAC_v2_gene30149 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1370
Name:  ? Tp57577_TGAC_v2_gene30149 Secondary Identifier:  ? PAC:35983719
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30149 0.5kb upstream 0.5kb upstream 2243 true Tp57577_TGAC_v2_LG5: 13263696-13265938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 13263696-13264195 Trifolium pratense
Tp57577_TGAC_v2_gene30149 0.5kb downstream 0.5kb downstream 2243 true Tp57577_TGAC_v2_LG5: 13264196-13266438 Trifolium pratense
Tp57577_TGAC_v2_gene30149 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 13265939-13266438 Trifolium pratense
Tp57577_TGAC_v2_gene30149 1.0kb upstream 1.0kb upstream 2743 true Tp57577_TGAC_v2_LG5: 13263196-13265938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 13263196-13264195 Trifolium pratense
Tp57577_TGAC_v2_gene30149 1.0kb downstream 1.0kb downstream 2743 true Tp57577_TGAC_v2_LG5: 13264196-13266938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 13265939-13266938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 2.0kb upstream 2.0kb upstream 3743 true Tp57577_TGAC_v2_LG5: 13262196-13265938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 13262196-13264195 Trifolium pratense
Tp57577_TGAC_v2_gene30149 2.0kb downstream 2.0kb downstream 3743 true Tp57577_TGAC_v2_LG5: 13264196-13267938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 13265939-13267938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 5.0kb upstream 5.0kb upstream 6743 true Tp57577_TGAC_v2_LG5: 13259196-13265938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 13259196-13264195 Trifolium pratense
Tp57577_TGAC_v2_gene30149 5.0kb downstream 5.0kb downstream 6743 true Tp57577_TGAC_v2_LG5: 13264196-13270938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 13265939-13270938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 10.0kb upstream 10.0kb upstream 11743 true Tp57577_TGAC_v2_LG5: 13254196-13265938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 13254196-13264195 Trifolium pratense
Tp57577_TGAC_v2_gene30149 10.0kb downstream 10.0kb downstream 11743 true Tp57577_TGAC_v2_LG5: 13264196-13275938 Trifolium pratense
Tp57577_TGAC_v2_gene30149 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 13265939-13275938 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300887 5265 Fabidae View MSA
124063313 5270 Rosid View MSA
123738652 5271 Pentapetalae View MSA
122793005 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain