Gene : Tp57577_TGAC_v2_gene26839 T. pratense v2
Defline:  (1 of 1) PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Genomic Order:  1354
Name:  ? Tp57577_TGAC_v2_gene26839 Secondary Identifier:  ? PAC:35984411
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26839 0.5kb upstream 0.5kb upstream 3649 true Tp57577_TGAC_v2_LG5: 13039807-13043455 Trifolium pratense
Tp57577_TGAC_v2_gene26839 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 13042956-13043455 Trifolium pratense
Tp57577_TGAC_v2_gene26839 0.5kb downstream 0.5kb downstream 3649 true Tp57577_TGAC_v2_LG5: 13039307-13042955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 13039307-13039806 Trifolium pratense
Tp57577_TGAC_v2_gene26839 1.0kb upstream 1.0kb upstream 4149 true Tp57577_TGAC_v2_LG5: 13039807-13043955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 13042956-13043955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 1.0kb downstream 1.0kb downstream 4149 true Tp57577_TGAC_v2_LG5: 13038807-13042955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 13038807-13039806 Trifolium pratense
Tp57577_TGAC_v2_gene26839 2.0kb upstream 2.0kb upstream 5149 true Tp57577_TGAC_v2_LG5: 13039807-13044955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 13042956-13044955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 2.0kb downstream 2.0kb downstream 5149 true Tp57577_TGAC_v2_LG5: 13037807-13042955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 13037807-13039806 Trifolium pratense
Tp57577_TGAC_v2_gene26839 5.0kb upstream 5.0kb upstream 8149 true Tp57577_TGAC_v2_LG5: 13039807-13047955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 13042956-13047955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 5.0kb downstream 5.0kb downstream 8149 true Tp57577_TGAC_v2_LG5: 13034807-13042955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 13034807-13039806 Trifolium pratense
Tp57577_TGAC_v2_gene26839 10.0kb upstream 10.0kb upstream 13149 true Tp57577_TGAC_v2_LG5: 13039807-13052955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 13042956-13052955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 10.0kb downstream 10.0kb downstream 13149 true Tp57577_TGAC_v2_LG5: 13029807-13042955 Trifolium pratense
Tp57577_TGAC_v2_gene26839 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 13029807-13039806 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122312379 5265 Fabidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain