Gene : Tp57577_TGAC_v2_gene28529 T. pratense v2
Defline:  (1 of 1) K12670 - oligosaccharyltransferase complex subunit beta (WBP1) Genomic Order:  154
Name:  ? Tp57577_TGAC_v2_gene28529 Secondary Identifier:  ? PAC:35984807
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28529 0.5kb upstream 0.5kb upstream 5191 true Tp57577_TGAC_v2_LG5: 1615741-1620931 Trifolium pratense
Tp57577_TGAC_v2_gene28529 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 1620432-1620931 Trifolium pratense
Tp57577_TGAC_v2_gene28529 0.5kb downstream 0.5kb downstream 5191 true Tp57577_TGAC_v2_LG5: 1615241-1620431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 1615241-1615740 Trifolium pratense
Tp57577_TGAC_v2_gene28529 1.0kb upstream 1.0kb upstream 5691 true Tp57577_TGAC_v2_LG5: 1615741-1621431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 1620432-1621431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 1.0kb downstream 1.0kb downstream 5691 true Tp57577_TGAC_v2_LG5: 1614741-1620431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 1614741-1615740 Trifolium pratense
Tp57577_TGAC_v2_gene28529 2.0kb upstream 2.0kb upstream 6691 true Tp57577_TGAC_v2_LG5: 1615741-1622431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 1620432-1622431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 2.0kb downstream 2.0kb downstream 6691 true Tp57577_TGAC_v2_LG5: 1613741-1620431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 1613741-1615740 Trifolium pratense
Tp57577_TGAC_v2_gene28529 5.0kb upstream 5.0kb upstream 9691 true Tp57577_TGAC_v2_LG5: 1615741-1625431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 1620432-1625431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 5.0kb downstream 5.0kb downstream 9691 true Tp57577_TGAC_v2_LG5: 1610741-1620431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 1610741-1615740 Trifolium pratense
Tp57577_TGAC_v2_gene28529 10.0kb upstream 10.0kb upstream 14691 true Tp57577_TGAC_v2_LG5: 1615741-1630431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 1620432-1630431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 10.0kb downstream 10.0kb downstream 14691 true Tp57577_TGAC_v2_LG5: 1605741-1620431 Trifolium pratense
Tp57577_TGAC_v2_gene28529 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 1605741-1615740 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300131 5265 Fabidae View MSA
124068275 5270 Rosid View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain