Gene : Tp57577_TGAC_v2_gene37486 T. pratense v2
Defline:  (1 of 2) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  752
Name:  ? Tp57577_TGAC_v2_gene37486 Secondary Identifier:  ? PAC:35984843
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7560 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37486 0.5kb upstream 0.5kb upstream 5534 true Tp57577_TGAC_v2_LG5: 7639786-7645319 Trifolium pratense
Tp57577_TGAC_v2_gene37486 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 7644820-7645319 Trifolium pratense
Tp57577_TGAC_v2_gene37486 0.5kb downstream 0.5kb downstream 5534 true Tp57577_TGAC_v2_LG5: 7639286-7644819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 7639286-7639785 Trifolium pratense
Tp57577_TGAC_v2_gene37486 1.0kb upstream 1.0kb upstream 6034 true Tp57577_TGAC_v2_LG5: 7639786-7645819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 7644820-7645819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 1.0kb downstream 1.0kb downstream 6034 true Tp57577_TGAC_v2_LG5: 7638786-7644819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 7638786-7639785 Trifolium pratense
Tp57577_TGAC_v2_gene37486 2.0kb upstream 2.0kb upstream 7034 true Tp57577_TGAC_v2_LG5: 7639786-7646819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 7644820-7646819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 2.0kb downstream 2.0kb downstream 7034 true Tp57577_TGAC_v2_LG5: 7637786-7644819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 7637786-7639785 Trifolium pratense
Tp57577_TGAC_v2_gene37486 5.0kb upstream 5.0kb upstream 10034 true Tp57577_TGAC_v2_LG5: 7639786-7649819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 7644820-7649819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 5.0kb downstream 5.0kb downstream 10034 true Tp57577_TGAC_v2_LG5: 7634786-7644819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 7634786-7639785 Trifolium pratense
Tp57577_TGAC_v2_gene37486 10.0kb upstream 10.0kb upstream 15034 true Tp57577_TGAC_v2_LG5: 7639786-7654819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 7644820-7654819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 10.0kb downstream 10.0kb downstream 15034 true Tp57577_TGAC_v2_LG5: 7629786-7644819 Trifolium pratense
Tp57577_TGAC_v2_gene37486 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 7629786-7639785 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
122304768 5265 Fabidae View MSA
124066605 5270 Rosid View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain