Gene : Tp57577_TGAC_v2_gene35233 T. pratense v2
Defline:  (1 of 1) PTHR10742:SF246 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 1 Genomic Order:  40
Name:  ? Tp57577_TGAC_v2_gene35233 Secondary Identifier:  ? PAC:35984664
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6441 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35233 0.5kb upstream 0.5kb upstream 3218 true Tp57577_TGAC_v2_LG5: 417723-420940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 417723-418222 Trifolium pratense
Tp57577_TGAC_v2_gene35233 0.5kb downstream 0.5kb downstream 3218 true Tp57577_TGAC_v2_LG5: 418223-421440 Trifolium pratense
Tp57577_TGAC_v2_gene35233 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 420941-421440 Trifolium pratense
Tp57577_TGAC_v2_gene35233 1.0kb upstream 1.0kb upstream 3718 true Tp57577_TGAC_v2_LG5: 417223-420940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 417223-418222 Trifolium pratense
Tp57577_TGAC_v2_gene35233 1.0kb downstream 1.0kb downstream 3718 true Tp57577_TGAC_v2_LG5: 418223-421940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 420941-421940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 2.0kb upstream 2.0kb upstream 4718 true Tp57577_TGAC_v2_LG5: 416223-420940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 416223-418222 Trifolium pratense
Tp57577_TGAC_v2_gene35233 2.0kb downstream 2.0kb downstream 4718 true Tp57577_TGAC_v2_LG5: 418223-422940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 420941-422940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 5.0kb upstream 5.0kb upstream 7718 true Tp57577_TGAC_v2_LG5: 413223-420940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 413223-418222 Trifolium pratense
Tp57577_TGAC_v2_gene35233 5.0kb downstream 5.0kb downstream 7718 true Tp57577_TGAC_v2_LG5: 418223-425940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 420941-425940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 10.0kb upstream 10.0kb upstream 12718 true Tp57577_TGAC_v2_LG5: 408223-420940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 408223-418222 Trifolium pratense
Tp57577_TGAC_v2_gene35233 10.0kb downstream 10.0kb downstream 12718 true Tp57577_TGAC_v2_LG5: 418223-430940 Trifolium pratense
Tp57577_TGAC_v2_gene35233 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 420941-430940 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300219 5265 Fabidae View MSA
124062162 5270 Rosid View MSA
123738234 5271 Pentapetalae View MSA
122786001 5272 Eudicot View MSA
122043910 5273 Angiosperm View MSA
121310209 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain