Gene : Tp57577_TGAC_v2_gene38373 T. pratense v2
Defline:  (1 of 3) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Genomic Order:  1195
Name:  ? Tp57577_TGAC_v2_gene38373 Secondary Identifier:  ? PAC:35983686
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38373 0.5kb upstream 0.5kb upstream 5297 true Tp57577_TGAC_v2_LG5: 11604004-11609300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 11604004-11604503 Trifolium pratense
Tp57577_TGAC_v2_gene38373 0.5kb downstream 0.5kb downstream 5297 true Tp57577_TGAC_v2_LG5: 11604504-11609800 Trifolium pratense
Tp57577_TGAC_v2_gene38373 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 11609301-11609800 Trifolium pratense
Tp57577_TGAC_v2_gene38373 1.0kb upstream 1.0kb upstream 5797 true Tp57577_TGAC_v2_LG5: 11603504-11609300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 11603504-11604503 Trifolium pratense
Tp57577_TGAC_v2_gene38373 1.0kb downstream 1.0kb downstream 5797 true Tp57577_TGAC_v2_LG5: 11604504-11610300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 11609301-11610300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 2.0kb upstream 2.0kb upstream 6797 true Tp57577_TGAC_v2_LG5: 11602504-11609300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 11602504-11604503 Trifolium pratense
Tp57577_TGAC_v2_gene38373 2.0kb downstream 2.0kb downstream 6797 true Tp57577_TGAC_v2_LG5: 11604504-11611300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 11609301-11611300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 5.0kb upstream 5.0kb upstream 9797 true Tp57577_TGAC_v2_LG5: 11599504-11609300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 11599504-11604503 Trifolium pratense
Tp57577_TGAC_v2_gene38373 5.0kb downstream 5.0kb downstream 9797 true Tp57577_TGAC_v2_LG5: 11604504-11614300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 11609301-11614300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 10.0kb upstream 10.0kb upstream 14797 true Tp57577_TGAC_v2_LG5: 11594504-11609300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 11594504-11604503 Trifolium pratense
Tp57577_TGAC_v2_gene38373 10.0kb downstream 10.0kb downstream 14797 true Tp57577_TGAC_v2_LG5: 11604504-11619300 Trifolium pratense
Tp57577_TGAC_v2_gene38373 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 11609301-11619300 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304199 5265 Fabidae View MSA
124073385 5270 Rosid View MSA
123737180 5271 Pentapetalae View MSA
122791950 5272 Eudicot View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain