Gene : Tp57577_TGAC_v2_gene37612 T. pratense v2
Defline:  (1 of 1) PTHR10683:SF10 - TRANSALDOLASE-LIKE PROTEIN Genomic Order:  873
Name:  ? Tp57577_TGAC_v2_gene37612 Secondary Identifier:  ? PAC:35983995
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense NONOXIPENT-PWY Trifolium pratense pathologic  
Tpratense PENTOSE-P-PWY Trifolium pratense pathologic  
Tpratense PWY-5723 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37612 0.5kb upstream 0.5kb upstream 5516 true Tp57577_TGAC_v2_LG5: 8562791-8568306 Trifolium pratense
Tp57577_TGAC_v2_gene37612 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 8567807-8568306 Trifolium pratense
Tp57577_TGAC_v2_gene37612 0.5kb downstream 0.5kb downstream 5516 true Tp57577_TGAC_v2_LG5: 8562291-8567806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 8562291-8562790 Trifolium pratense
Tp57577_TGAC_v2_gene37612 1.0kb upstream 1.0kb upstream 6016 true Tp57577_TGAC_v2_LG5: 8562791-8568806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 8567807-8568806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 1.0kb downstream 1.0kb downstream 6016 true Tp57577_TGAC_v2_LG5: 8561791-8567806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 8561791-8562790 Trifolium pratense
Tp57577_TGAC_v2_gene37612 2.0kb upstream 2.0kb upstream 7016 true Tp57577_TGAC_v2_LG5: 8562791-8569806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 8567807-8569806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 2.0kb downstream 2.0kb downstream 7016 true Tp57577_TGAC_v2_LG5: 8560791-8567806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 8560791-8562790 Trifolium pratense
Tp57577_TGAC_v2_gene37612 5.0kb upstream 5.0kb upstream 10016 true Tp57577_TGAC_v2_LG5: 8562791-8572806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 8567807-8572806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 5.0kb downstream 5.0kb downstream 10016 true Tp57577_TGAC_v2_LG5: 8557791-8567806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 8557791-8562790 Trifolium pratense
Tp57577_TGAC_v2_gene37612 10.0kb upstream 10.0kb upstream 15016 true Tp57577_TGAC_v2_LG5: 8562791-8577806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 8567807-8577806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 10.0kb downstream 10.0kb downstream 15016 true Tp57577_TGAC_v2_LG5: 8552791-8567806 Trifolium pratense
Tp57577_TGAC_v2_gene37612 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 8552791-8562790 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305152 5265 Fabidae View MSA
124061321 5270 Rosid View MSA
123737527 5271 Pentapetalae View MSA
122787081 5272 Eudicot View MSA
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain