Gene : Tp57577_TGAC_v2_gene9143 T. pratense v2
Defline:  (1 of 1) PTHR10003:SF31 - SUPEROXIDE DISMUTASE [CU-ZN] 3 Genomic Order:  28
Name:  ? Tp57577_TGAC_v2_gene9143 Secondary Identifier:  ? PAC:35984338
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense DETOX1-PWY Trifolium pratense pathologic  
Tpratense DETOX1-PWY-1 Trifolium pratense pathologic  
Tpratense PWY-6854 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9143 0.5kb upstream 0.5kb upstream 6429 true Tp57577_TGAC_v2_LG5: 269471-275899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 269471-269970 Trifolium pratense
Tp57577_TGAC_v2_gene9143 0.5kb downstream 0.5kb downstream 6429 true Tp57577_TGAC_v2_LG5: 269971-276399 Trifolium pratense
Tp57577_TGAC_v2_gene9143 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 275900-276399 Trifolium pratense
Tp57577_TGAC_v2_gene9143 1.0kb upstream 1.0kb upstream 6929 true Tp57577_TGAC_v2_LG5: 268971-275899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 268971-269970 Trifolium pratense
Tp57577_TGAC_v2_gene9143 1.0kb downstream 1.0kb downstream 6929 true Tp57577_TGAC_v2_LG5: 269971-276899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 275900-276899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 2.0kb upstream 2.0kb upstream 7929 true Tp57577_TGAC_v2_LG5: 267971-275899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 267971-269970 Trifolium pratense
Tp57577_TGAC_v2_gene9143 2.0kb downstream 2.0kb downstream 7929 true Tp57577_TGAC_v2_LG5: 269971-277899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 275900-277899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 5.0kb upstream 5.0kb upstream 10929 true Tp57577_TGAC_v2_LG5: 264971-275899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 264971-269970 Trifolium pratense
Tp57577_TGAC_v2_gene9143 5.0kb downstream 5.0kb downstream 10929 true Tp57577_TGAC_v2_LG5: 269971-280899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 275900-280899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 10.0kb upstream 10.0kb upstream 15929 true Tp57577_TGAC_v2_LG5: 259971-275899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 259971-269970 Trifolium pratense
Tp57577_TGAC_v2_gene9143 10.0kb downstream 10.0kb downstream 15929 true Tp57577_TGAC_v2_LG5: 269971-285899 Trifolium pratense
Tp57577_TGAC_v2_gene9143 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 275900-285899 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302817 5265 Fabidae View MSA
124071759 5270 Rosid View MSA
123743890 5271 Pentapetalae View MSA
122797763 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain