Gene : Tp57577_TGAC_v2_gene38391 T. pratense v2
Defline:  (1 of 7) K05857 - phosphatidylinositol phospholipase C, delta (PLCD) Genomic Order:  1197
Name:  ? Tp57577_TGAC_v2_gene38391 Secondary Identifier:  ? PAC:35983847
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPASYN-PWY Trifolium pratense pathologic  
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6367 Trifolium pratense pathologic  
Tpratense PWY-7039 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38391 0.5kb upstream 0.5kb upstream 5058 true Tp57577_TGAC_v2_LG5: 11635021-11640078 Trifolium pratense
Tp57577_TGAC_v2_gene38391 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 11639579-11640078 Trifolium pratense
Tp57577_TGAC_v2_gene38391 0.5kb downstream 0.5kb downstream 5058 true Tp57577_TGAC_v2_LG5: 11634521-11639578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 11634521-11635020 Trifolium pratense
Tp57577_TGAC_v2_gene38391 1.0kb upstream 1.0kb upstream 5558 true Tp57577_TGAC_v2_LG5: 11635021-11640578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 11639579-11640578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 1.0kb downstream 1.0kb downstream 5558 true Tp57577_TGAC_v2_LG5: 11634021-11639578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 11634021-11635020 Trifolium pratense
Tp57577_TGAC_v2_gene38391 2.0kb upstream 2.0kb upstream 6558 true Tp57577_TGAC_v2_LG5: 11635021-11641578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 11639579-11641578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 2.0kb downstream 2.0kb downstream 6558 true Tp57577_TGAC_v2_LG5: 11633021-11639578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 11633021-11635020 Trifolium pratense
Tp57577_TGAC_v2_gene38391 5.0kb upstream 5.0kb upstream 9558 true Tp57577_TGAC_v2_LG5: 11635021-11644578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 11639579-11644578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 5.0kb downstream 5.0kb downstream 9558 true Tp57577_TGAC_v2_LG5: 11630021-11639578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 11630021-11635020 Trifolium pratense
Tp57577_TGAC_v2_gene38391 10.0kb upstream 10.0kb upstream 14558 true Tp57577_TGAC_v2_LG5: 11635021-11649578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 11639579-11649578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 10.0kb downstream 10.0kb downstream 14558 true Tp57577_TGAC_v2_LG5: 11625021-11639578 Trifolium pratense
Tp57577_TGAC_v2_gene38391 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 11625021-11635020 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311245 5265 Fabidae View MSA
124061623 5270 Rosid View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain