Gene : Tp57577_TGAC_v2_gene38393 T. pratense v2
Defline:  (1 of 1) PTHR23070//PTHR23070:SF42 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  1227
Name:  ? Tp57577_TGAC_v2_gene38393 Secondary Identifier:  ? PAC:35983420
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38393 0.5kb upstream 0.5kb upstream 2559 true Tp57577_TGAC_v2_LG5: 11935439-11937997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 11935439-11935938 Trifolium pratense
Tp57577_TGAC_v2_gene38393 0.5kb downstream 0.5kb downstream 2559 true Tp57577_TGAC_v2_LG5: 11935939-11938497 Trifolium pratense
Tp57577_TGAC_v2_gene38393 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 11937998-11938497 Trifolium pratense
Tp57577_TGAC_v2_gene38393 1.0kb upstream 1.0kb upstream 3059 true Tp57577_TGAC_v2_LG5: 11934939-11937997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 11934939-11935938 Trifolium pratense
Tp57577_TGAC_v2_gene38393 1.0kb downstream 1.0kb downstream 3059 true Tp57577_TGAC_v2_LG5: 11935939-11938997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 11937998-11938997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 2.0kb upstream 2.0kb upstream 4059 true Tp57577_TGAC_v2_LG5: 11933939-11937997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 11933939-11935938 Trifolium pratense
Tp57577_TGAC_v2_gene38393 2.0kb downstream 2.0kb downstream 4059 true Tp57577_TGAC_v2_LG5: 11935939-11939997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 11937998-11939997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 5.0kb upstream 5.0kb upstream 7059 true Tp57577_TGAC_v2_LG5: 11930939-11937997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 11930939-11935938 Trifolium pratense
Tp57577_TGAC_v2_gene38393 5.0kb downstream 5.0kb downstream 7059 true Tp57577_TGAC_v2_LG5: 11935939-11942997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 11937998-11942997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 10.0kb upstream 10.0kb upstream 12059 true Tp57577_TGAC_v2_LG5: 11925939-11937997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 11925939-11935938 Trifolium pratense
Tp57577_TGAC_v2_gene38393 10.0kb downstream 10.0kb downstream 12059 true Tp57577_TGAC_v2_LG5: 11935939-11947997 Trifolium pratense
Tp57577_TGAC_v2_gene38393 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 11937998-11947997 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122307809 5265 Fabidae View MSA
124050569 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain