Gene : Tp57577_TGAC_v2_gene38388 T. pratense v2
Defline:  (1 of 1) PTHR22975 - UBIQUITIN SPECIFIC PROTEINASE Genomic Order:  1233
Name:  ? Tp57577_TGAC_v2_gene38388 Secondary Identifier:  ? PAC:35984931
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38388 0.5kb upstream 0.5kb upstream 10327 true Tp57577_TGAC_v2_LG5: 11987761-11998087 Trifolium pratense
Tp57577_TGAC_v2_gene38388 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 11997588-11998087 Trifolium pratense
Tp57577_TGAC_v2_gene38388 0.5kb downstream 0.5kb downstream 10327 true Tp57577_TGAC_v2_LG5: 11987261-11997587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 11987261-11987760 Trifolium pratense
Tp57577_TGAC_v2_gene38388 1.0kb upstream 1.0kb upstream 10827 true Tp57577_TGAC_v2_LG5: 11987761-11998587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 11997588-11998587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 1.0kb downstream 1.0kb downstream 10827 true Tp57577_TGAC_v2_LG5: 11986761-11997587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 11986761-11987760 Trifolium pratense
Tp57577_TGAC_v2_gene38388 2.0kb upstream 2.0kb upstream 11827 true Tp57577_TGAC_v2_LG5: 11987761-11999587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 11997588-11999587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 2.0kb downstream 2.0kb downstream 11827 true Tp57577_TGAC_v2_LG5: 11985761-11997587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 11985761-11987760 Trifolium pratense
Tp57577_TGAC_v2_gene38388 5.0kb upstream 5.0kb upstream 14827 true Tp57577_TGAC_v2_LG5: 11987761-12002587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 11997588-12002587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 5.0kb downstream 5.0kb downstream 14827 true Tp57577_TGAC_v2_LG5: 11982761-11997587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 11982761-11987760 Trifolium pratense
Tp57577_TGAC_v2_gene38388 10.0kb upstream 10.0kb upstream 19827 true Tp57577_TGAC_v2_LG5: 11987761-12007587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 11997588-12007587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 10.0kb downstream 10.0kb downstream 19827 true Tp57577_TGAC_v2_LG5: 11977761-11997587 Trifolium pratense
Tp57577_TGAC_v2_gene38388 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 11977761-11987760 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304724 5265 Fabidae View MSA
124072872 5270 Rosid View MSA
123749894 5271 Pentapetalae View MSA
122797305 5272 Eudicot View MSA
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain