Gene : Tp57577_TGAC_v2_gene38447 T. pratense v2
Defline:  (1 of 1) PF00642//PF13637 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (many copies) (Ank_4) Genomic Order:  1190
Name:  ? Tp57577_TGAC_v2_gene38447 Secondary Identifier:  ? PAC:35983549
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38447 0.5kb upstream 0.5kb upstream 3824 true Tp57577_TGAC_v2_LG5: 11530405-11534228 Trifolium pratense
Tp57577_TGAC_v2_gene38447 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 11533729-11534228 Trifolium pratense
Tp57577_TGAC_v2_gene38447 0.5kb downstream 0.5kb downstream 3824 true Tp57577_TGAC_v2_LG5: 11529905-11533728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 11529905-11530404 Trifolium pratense
Tp57577_TGAC_v2_gene38447 1.0kb upstream 1.0kb upstream 4324 true Tp57577_TGAC_v2_LG5: 11530405-11534728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 11533729-11534728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 1.0kb downstream 1.0kb downstream 4324 true Tp57577_TGAC_v2_LG5: 11529405-11533728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 11529405-11530404 Trifolium pratense
Tp57577_TGAC_v2_gene38447 2.0kb upstream 2.0kb upstream 5324 true Tp57577_TGAC_v2_LG5: 11530405-11535728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 11533729-11535728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 2.0kb downstream 2.0kb downstream 5324 true Tp57577_TGAC_v2_LG5: 11528405-11533728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 11528405-11530404 Trifolium pratense
Tp57577_TGAC_v2_gene38447 5.0kb upstream 5.0kb upstream 8324 true Tp57577_TGAC_v2_LG5: 11530405-11538728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 11533729-11538728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 5.0kb downstream 5.0kb downstream 8324 true Tp57577_TGAC_v2_LG5: 11525405-11533728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 11525405-11530404 Trifolium pratense
Tp57577_TGAC_v2_gene38447 10.0kb upstream 10.0kb upstream 13324 true Tp57577_TGAC_v2_LG5: 11530405-11543728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 11533729-11543728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 10.0kb downstream 10.0kb downstream 13324 true Tp57577_TGAC_v2_LG5: 11520405-11533728 Trifolium pratense
Tp57577_TGAC_v2_gene38447 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 11520405-11530404 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305976 5265 Fabidae View MSA
124066606 5270 Rosid View MSA
123753423 5271 Pentapetalae View MSA
122793628 5272 Eudicot View MSA
122049418 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain