Gene : Tp57577_TGAC_v2_gene1097 T. pratense v2
Defline:  (1 of 1) PTHR23416:SF2 - SERINE ACETYLTRANSFERASE 5 Genomic Order:  1497
Name:  ? Tp57577_TGAC_v2_gene1097 Secondary Identifier:  ? PAC:35973909
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CYSTSYN-PWY Trifolium pratense pathologic  
Tpratense PWY-6936 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1097 0.5kb upstream 0.5kb upstream 2749 true Tp57577_TGAC_v2_LG6: 12340647-12343395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 12340647-12341146 Trifolium pratense
Tp57577_TGAC_v2_gene1097 0.5kb downstream 0.5kb downstream 2749 true Tp57577_TGAC_v2_LG6: 12341147-12343895 Trifolium pratense
Tp57577_TGAC_v2_gene1097 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 12343396-12343895 Trifolium pratense
Tp57577_TGAC_v2_gene1097 1.0kb upstream 1.0kb upstream 3249 true Tp57577_TGAC_v2_LG6: 12340147-12343395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 12340147-12341146 Trifolium pratense
Tp57577_TGAC_v2_gene1097 1.0kb downstream 1.0kb downstream 3249 true Tp57577_TGAC_v2_LG6: 12341147-12344395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 12343396-12344395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 2.0kb upstream 2.0kb upstream 4249 true Tp57577_TGAC_v2_LG6: 12339147-12343395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 12339147-12341146 Trifolium pratense
Tp57577_TGAC_v2_gene1097 2.0kb downstream 2.0kb downstream 4249 true Tp57577_TGAC_v2_LG6: 12341147-12345395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 12343396-12345395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 5.0kb upstream 5.0kb upstream 7249 true Tp57577_TGAC_v2_LG6: 12336147-12343395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 12336147-12341146 Trifolium pratense
Tp57577_TGAC_v2_gene1097 5.0kb downstream 5.0kb downstream 7249 true Tp57577_TGAC_v2_LG6: 12341147-12348395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 12343396-12348395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 10.0kb upstream 10.0kb upstream 12249 true Tp57577_TGAC_v2_LG6: 12331147-12343395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 12331147-12341146 Trifolium pratense
Tp57577_TGAC_v2_gene1097 10.0kb downstream 10.0kb downstream 12249 true Tp57577_TGAC_v2_LG6: 12341147-12353395 Trifolium pratense
Tp57577_TGAC_v2_gene1097 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 12343396-12353395 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309116 5265 Fabidae View MSA
124068098 5270 Rosid View MSA
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain