Gene : Tp57577_TGAC_v2_gene9532 T. pratense v2

Defline:  (1 of 1) K10880 - DNA-repair protein XRCC3 (XRCC3) Genomic Order:  332
Name:  ? Tp57577_TGAC_v2_gene9532 Secondary Identifier:  ? PAC:35984483

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9532 0.5kb upstream 0.5kb upstream 3683 true Tp57577_TGAC_v2_LG5: 3484354-3488036 Trifolium pratense
Tp57577_TGAC_v2_gene9532 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 3487537-3488036 Trifolium pratense
Tp57577_TGAC_v2_gene9532 0.5kb downstream 0.5kb downstream 3683 true Tp57577_TGAC_v2_LG5: 3483854-3487536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 3483854-3484353 Trifolium pratense
Tp57577_TGAC_v2_gene9532 1.0kb upstream 1.0kb upstream 4183 true Tp57577_TGAC_v2_LG5: 3484354-3488536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 3487537-3488536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 1.0kb downstream 1.0kb downstream 4183 true Tp57577_TGAC_v2_LG5: 3483354-3487536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 3483354-3484353 Trifolium pratense
Tp57577_TGAC_v2_gene9532 2.0kb upstream 2.0kb upstream 5183 true Tp57577_TGAC_v2_LG5: 3484354-3489536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 3487537-3489536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 2.0kb downstream 2.0kb downstream 5183 true Tp57577_TGAC_v2_LG5: 3482354-3487536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 3482354-3484353 Trifolium pratense
Tp57577_TGAC_v2_gene9532 5.0kb upstream 5.0kb upstream 8183 true Tp57577_TGAC_v2_LG5: 3484354-3492536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 3487537-3492536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 5.0kb downstream 5.0kb downstream 8183 true Tp57577_TGAC_v2_LG5: 3479354-3487536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 3479354-3484353 Trifolium pratense
Tp57577_TGAC_v2_gene9532 10.0kb upstream 10.0kb upstream 13183 true Tp57577_TGAC_v2_LG5: 3484354-3497536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 3487537-3497536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 10.0kb downstream 10.0kb downstream 13183 true Tp57577_TGAC_v2_LG5: 3474354-3487536 Trifolium pratense
Tp57577_TGAC_v2_gene9532 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 3474354-3484353 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309997 5265 Fabidae View MSA
124069391 5270 Rosid View MSA
123741903 5271 Pentapetalae View MSA
122794099 5272 Eudicot View MSA
122048125 5273 Angiosperm View MSA
121349692 5274 Embryophyte View MSA
123425830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain