Gene : Tp57577_TGAC_v2_gene9544 T. pratense v2
Defline:  (1 of 1) PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  345
Name:  ? Tp57577_TGAC_v2_gene9544 Secondary Identifier:  ? PAC:35984832
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9544 0.5kb upstream 0.5kb upstream 2818 true Tp57577_TGAC_v2_LG5: 3596049-3598866 Trifolium pratense
Tp57577_TGAC_v2_gene9544 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 3598367-3598866 Trifolium pratense
Tp57577_TGAC_v2_gene9544 0.5kb downstream 0.5kb downstream 2818 true Tp57577_TGAC_v2_LG5: 3595549-3598366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 3595549-3596048 Trifolium pratense
Tp57577_TGAC_v2_gene9544 1.0kb upstream 1.0kb upstream 3318 true Tp57577_TGAC_v2_LG5: 3596049-3599366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 3598367-3599366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 1.0kb downstream 1.0kb downstream 3318 true Tp57577_TGAC_v2_LG5: 3595049-3598366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 3595049-3596048 Trifolium pratense
Tp57577_TGAC_v2_gene9544 2.0kb upstream 2.0kb upstream 4318 true Tp57577_TGAC_v2_LG5: 3596049-3600366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 3598367-3600366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 2.0kb downstream 2.0kb downstream 4318 true Tp57577_TGAC_v2_LG5: 3594049-3598366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 3594049-3596048 Trifolium pratense
Tp57577_TGAC_v2_gene9544 5.0kb upstream 5.0kb upstream 7318 true Tp57577_TGAC_v2_LG5: 3596049-3603366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 3598367-3603366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 5.0kb downstream 5.0kb downstream 7318 true Tp57577_TGAC_v2_LG5: 3591049-3598366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 3591049-3596048 Trifolium pratense
Tp57577_TGAC_v2_gene9544 10.0kb upstream 10.0kb upstream 12318 true Tp57577_TGAC_v2_LG5: 3596049-3608366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 3598367-3608366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 10.0kb downstream 10.0kb downstream 12318 true Tp57577_TGAC_v2_LG5: 3586049-3598366 Trifolium pratense
Tp57577_TGAC_v2_gene9544 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 3586049-3596048 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314395 5265 Fabidae View MSA
124037695 5270 Rosid View MSA
123743884 5271 Pentapetalae View MSA
122770801 5272 Eudicot View MSA
122048202 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310882 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain