Gene : Tp57577_TGAC_v2_gene15488 T. pratense v2
Defline:  (1 of 21) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  2515
Name:  ? Tp57577_TGAC_v2_gene15488 Secondary Identifier:  ? PAC:35974578
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15488 0.5kb upstream 0.5kb upstream 4063 true Tp57577_TGAC_v2_LG6: 21570814-21574876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 21570814-21571313 Trifolium pratense
Tp57577_TGAC_v2_gene15488 0.5kb downstream 0.5kb downstream 4063 true Tp57577_TGAC_v2_LG6: 21571314-21575376 Trifolium pratense
Tp57577_TGAC_v2_gene15488 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 21574877-21575376 Trifolium pratense
Tp57577_TGAC_v2_gene15488 1.0kb upstream 1.0kb upstream 4563 true Tp57577_TGAC_v2_LG6: 21570314-21574876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 21570314-21571313 Trifolium pratense
Tp57577_TGAC_v2_gene15488 1.0kb downstream 1.0kb downstream 4563 true Tp57577_TGAC_v2_LG6: 21571314-21575876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 21574877-21575876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 2.0kb upstream 2.0kb upstream 5563 true Tp57577_TGAC_v2_LG6: 21569314-21574876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 21569314-21571313 Trifolium pratense
Tp57577_TGAC_v2_gene15488 2.0kb downstream 2.0kb downstream 5563 true Tp57577_TGAC_v2_LG6: 21571314-21576876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 21574877-21576876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 5.0kb upstream 5.0kb upstream 8563 true Tp57577_TGAC_v2_LG6: 21566314-21574876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 21566314-21571313 Trifolium pratense
Tp57577_TGAC_v2_gene15488 5.0kb downstream 5.0kb downstream 8563 true Tp57577_TGAC_v2_LG6: 21571314-21579876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 21574877-21579876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 10.0kb upstream 10.0kb upstream 13563 true Tp57577_TGAC_v2_LG6: 21561314-21574876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 21561314-21571313 Trifolium pratense
Tp57577_TGAC_v2_gene15488 10.0kb downstream 10.0kb downstream 13563 true Tp57577_TGAC_v2_LG6: 21571314-21584876 Trifolium pratense
Tp57577_TGAC_v2_gene15488 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 21574877-21584876 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305570 5265 Fabidae View MSA
124072132 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain