Gene : Tp57577_TGAC_v2_gene15501 T. pratense v2
Defline:  (1 of 3) 3.2.1.52 - Beta-N-acetylhexosaminidase / N-acetyl-beta-glucosaminidase Genomic Order:  2527
Name:  ? Tp57577_TGAC_v2_gene15501 Secondary Identifier:  ? PAC:35974659
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6902 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15501 0.5kb upstream 0.5kb upstream 7242 true Tp57577_TGAC_v2_LG6: 21631492-21638733 Trifolium pratense
Tp57577_TGAC_v2_gene15501 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 21638234-21638733 Trifolium pratense
Tp57577_TGAC_v2_gene15501 0.5kb downstream 0.5kb downstream 7242 true Tp57577_TGAC_v2_LG6: 21630992-21638233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 21630992-21631491 Trifolium pratense
Tp57577_TGAC_v2_gene15501 1.0kb upstream 1.0kb upstream 7742 true Tp57577_TGAC_v2_LG6: 21631492-21639233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 21638234-21639233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 1.0kb downstream 1.0kb downstream 7742 true Tp57577_TGAC_v2_LG6: 21630492-21638233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 21630492-21631491 Trifolium pratense
Tp57577_TGAC_v2_gene15501 2.0kb upstream 2.0kb upstream 8742 true Tp57577_TGAC_v2_LG6: 21631492-21640233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 21638234-21640233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 2.0kb downstream 2.0kb downstream 8742 true Tp57577_TGAC_v2_LG6: 21629492-21638233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 21629492-21631491 Trifolium pratense
Tp57577_TGAC_v2_gene15501 5.0kb upstream 5.0kb upstream 11742 true Tp57577_TGAC_v2_LG6: 21631492-21643233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 21638234-21643233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 5.0kb downstream 5.0kb downstream 11742 true Tp57577_TGAC_v2_LG6: 21626492-21638233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 21626492-21631491 Trifolium pratense
Tp57577_TGAC_v2_gene15501 10.0kb upstream 10.0kb upstream 16742 true Tp57577_TGAC_v2_LG6: 21631492-21648233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 21638234-21648233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 10.0kb downstream 10.0kb downstream 16742 true Tp57577_TGAC_v2_LG6: 21621492-21638233 Trifolium pratense
Tp57577_TGAC_v2_gene15501 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 21621492-21631491 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310908 5265 Fabidae View MSA
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain