Gene : Tp57577_TGAC_v2_gene16752 T. pratense v2
Defline:  (1 of 1) KOG0978//KOG4593 - E3 ubiquitin ligase involved in syntaxin degradation // Mitotic checkpoint protein MAD1 Genomic Order:  200
Name:  ? Tp57577_TGAC_v2_gene16752 Secondary Identifier:  ? PAC:35976633
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16752 0.5kb upstream 0.5kb upstream 5944 true Tp57577_TGAC_v2_LG6: 1581853-1587796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 1581853-1582352 Trifolium pratense
Tp57577_TGAC_v2_gene16752 0.5kb downstream 0.5kb downstream 5944 true Tp57577_TGAC_v2_LG6: 1582353-1588296 Trifolium pratense
Tp57577_TGAC_v2_gene16752 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 1587797-1588296 Trifolium pratense
Tp57577_TGAC_v2_gene16752 1.0kb upstream 1.0kb upstream 6444 true Tp57577_TGAC_v2_LG6: 1581353-1587796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 1581353-1582352 Trifolium pratense
Tp57577_TGAC_v2_gene16752 1.0kb downstream 1.0kb downstream 6444 true Tp57577_TGAC_v2_LG6: 1582353-1588796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 1587797-1588796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 2.0kb upstream 2.0kb upstream 7444 true Tp57577_TGAC_v2_LG6: 1580353-1587796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 1580353-1582352 Trifolium pratense
Tp57577_TGAC_v2_gene16752 2.0kb downstream 2.0kb downstream 7444 true Tp57577_TGAC_v2_LG6: 1582353-1589796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 1587797-1589796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 5.0kb upstream 5.0kb upstream 10444 true Tp57577_TGAC_v2_LG6: 1577353-1587796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 1577353-1582352 Trifolium pratense
Tp57577_TGAC_v2_gene16752 5.0kb downstream 5.0kb downstream 10444 true Tp57577_TGAC_v2_LG6: 1582353-1592796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 1587797-1592796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 10.0kb upstream 10.0kb upstream 15444 true Tp57577_TGAC_v2_LG6: 1572353-1587796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 1572353-1582352 Trifolium pratense
Tp57577_TGAC_v2_gene16752 10.0kb downstream 10.0kb downstream 15444 true Tp57577_TGAC_v2_LG6: 1582353-1597796 Trifolium pratense
Tp57577_TGAC_v2_gene16752 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 1587797-1597796 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302115 5265 Fabidae View MSA
124068908 5270 Rosid View MSA
123737284 5271 Pentapetalae View MSA
122789700 5272 Eudicot View MSA
122042808 5273 Angiosperm View MSA
121349481 5274 Embryophyte View MSA
123381327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain