Gene : Tp57577_TGAC_v2_gene18234 T. pratense v2
Defline:  (1 of 2) K15326 - tRNA-splicing endonuclease subunit Sen54 (TSEN54) Genomic Order:  2086
Name:  ? Tp57577_TGAC_v2_gene18234 Secondary Identifier:  ? PAC:35974356
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18234 0.5kb upstream 0.5kb upstream 3047 true Tp57577_TGAC_v2_LG6: 17938895-17941941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 17938895-17939394 Trifolium pratense
Tp57577_TGAC_v2_gene18234 0.5kb downstream 0.5kb downstream 3047 true Tp57577_TGAC_v2_LG6: 17939395-17942441 Trifolium pratense
Tp57577_TGAC_v2_gene18234 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 17941942-17942441 Trifolium pratense
Tp57577_TGAC_v2_gene18234 1.0kb upstream 1.0kb upstream 3547 true Tp57577_TGAC_v2_LG6: 17938395-17941941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 17938395-17939394 Trifolium pratense
Tp57577_TGAC_v2_gene18234 1.0kb downstream 1.0kb downstream 3547 true Tp57577_TGAC_v2_LG6: 17939395-17942941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 17941942-17942941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 2.0kb upstream 2.0kb upstream 4547 true Tp57577_TGAC_v2_LG6: 17937395-17941941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 17937395-17939394 Trifolium pratense
Tp57577_TGAC_v2_gene18234 2.0kb downstream 2.0kb downstream 4547 true Tp57577_TGAC_v2_LG6: 17939395-17943941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 17941942-17943941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 5.0kb upstream 5.0kb upstream 7547 true Tp57577_TGAC_v2_LG6: 17934395-17941941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 17934395-17939394 Trifolium pratense
Tp57577_TGAC_v2_gene18234 5.0kb downstream 5.0kb downstream 7547 true Tp57577_TGAC_v2_LG6: 17939395-17946941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 17941942-17946941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 10.0kb upstream 10.0kb upstream 12547 true Tp57577_TGAC_v2_LG6: 17929395-17941941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 17929395-17939394 Trifolium pratense
Tp57577_TGAC_v2_gene18234 10.0kb downstream 10.0kb downstream 12547 true Tp57577_TGAC_v2_LG6: 17939395-17951941 Trifolium pratense
Tp57577_TGAC_v2_gene18234 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 17941942-17951941 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301544 5265 Fabidae View MSA
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain