Gene : Tp57577_TGAC_v2_gene1643 T. pratense v2
Defline:  (1 of 75) PF13947 - Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  362
Name:  ? Tp57577_TGAC_v2_gene1643 Secondary Identifier:  ? PAC:35975275
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1643 0.5kb upstream 0.5kb upstream 1380 true Tp57577_TGAC_v2_LG6: 2848842-2850221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 2848842-2849341 Trifolium pratense
Tp57577_TGAC_v2_gene1643 0.5kb downstream 0.5kb downstream 1380 true Tp57577_TGAC_v2_LG6: 2849342-2850721 Trifolium pratense
Tp57577_TGAC_v2_gene1643 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 2850222-2850721 Trifolium pratense
Tp57577_TGAC_v2_gene1643 1.0kb upstream 1.0kb upstream 1880 true Tp57577_TGAC_v2_LG6: 2848342-2850221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 2848342-2849341 Trifolium pratense
Tp57577_TGAC_v2_gene1643 1.0kb downstream 1.0kb downstream 1880 true Tp57577_TGAC_v2_LG6: 2849342-2851221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 2850222-2851221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 2.0kb upstream 2.0kb upstream 2880 true Tp57577_TGAC_v2_LG6: 2847342-2850221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 2847342-2849341 Trifolium pratense
Tp57577_TGAC_v2_gene1643 2.0kb downstream 2.0kb downstream 2880 true Tp57577_TGAC_v2_LG6: 2849342-2852221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 2850222-2852221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 5.0kb upstream 5.0kb upstream 5880 true Tp57577_TGAC_v2_LG6: 2844342-2850221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 2844342-2849341 Trifolium pratense
Tp57577_TGAC_v2_gene1643 5.0kb downstream 5.0kb downstream 5880 true Tp57577_TGAC_v2_LG6: 2849342-2855221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 2850222-2855221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 10.0kb upstream 10.0kb upstream 10880 true Tp57577_TGAC_v2_LG6: 2839342-2850221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 2839342-2849341 Trifolium pratense
Tp57577_TGAC_v2_gene1643 10.0kb downstream 10.0kb downstream 10880 true Tp57577_TGAC_v2_LG6: 2849342-2860221 Trifolium pratense
Tp57577_TGAC_v2_gene1643 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 2850222-2860221 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306223 5265 Fabidae View MSA
124070699 5270 Rosid View MSA
123749932 5271 Pentapetalae View MSA
122794455 5272 Eudicot View MSA
122051146 5273 Angiosperm View MSA
121312314 5274 Embryophyte View MSA
123349498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain