Gene : Tp57577_TGAC_v2_gene16437 T. pratense v2
Defline:  (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein Genomic Order:  577
Name:  ? Tp57577_TGAC_v2_gene16437 Secondary Identifier:  ? PAC:35973912
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16437 0.5kb upstream 0.5kb upstream 7509 true Tp57577_TGAC_v2_LG6: 4506290-4513798 Trifolium pratense
Tp57577_TGAC_v2_gene16437 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 4513299-4513798 Trifolium pratense
Tp57577_TGAC_v2_gene16437 0.5kb downstream 0.5kb downstream 7509 true Tp57577_TGAC_v2_LG6: 4505790-4513298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 4505790-4506289 Trifolium pratense
Tp57577_TGAC_v2_gene16437 1.0kb upstream 1.0kb upstream 8009 true Tp57577_TGAC_v2_LG6: 4506290-4514298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 4513299-4514298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 1.0kb downstream 1.0kb downstream 8009 true Tp57577_TGAC_v2_LG6: 4505290-4513298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 4505290-4506289 Trifolium pratense
Tp57577_TGAC_v2_gene16437 2.0kb upstream 2.0kb upstream 9009 true Tp57577_TGAC_v2_LG6: 4506290-4515298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 4513299-4515298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 2.0kb downstream 2.0kb downstream 9009 true Tp57577_TGAC_v2_LG6: 4504290-4513298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 4504290-4506289 Trifolium pratense
Tp57577_TGAC_v2_gene16437 5.0kb upstream 5.0kb upstream 12009 true Tp57577_TGAC_v2_LG6: 4506290-4518298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 4513299-4518298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 5.0kb downstream 5.0kb downstream 12009 true Tp57577_TGAC_v2_LG6: 4501290-4513298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 4501290-4506289 Trifolium pratense
Tp57577_TGAC_v2_gene16437 10.0kb upstream 10.0kb upstream 17009 true Tp57577_TGAC_v2_LG6: 4506290-4523298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 4513299-4523298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 10.0kb downstream 10.0kb downstream 17009 true Tp57577_TGAC_v2_LG6: 4496290-4513298 Trifolium pratense
Tp57577_TGAC_v2_gene16437 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 4496290-4506289 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310988 5265 Fabidae View MSA
124063578 5270 Rosid View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain