Gene : Tp57577_TGAC_v2_gene22681 T. pratense v2
Defline:  (1 of 1) KOG0733 - Nuclear AAA ATPase (VCP subfamily) Genomic Order:  1447
Name:  ? Tp57577_TGAC_v2_gene22681 Secondary Identifier:  ? PAC:35975687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22681 0.5kb upstream 0.5kb upstream 8879 true Tp57577_TGAC_v2_LG6: 11800995-11809873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 11800995-11801494 Trifolium pratense
Tp57577_TGAC_v2_gene22681 0.5kb downstream 0.5kb downstream 8879 true Tp57577_TGAC_v2_LG6: 11801495-11810373 Trifolium pratense
Tp57577_TGAC_v2_gene22681 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 11809874-11810373 Trifolium pratense
Tp57577_TGAC_v2_gene22681 1.0kb upstream 1.0kb upstream 9379 true Tp57577_TGAC_v2_LG6: 11800495-11809873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 11800495-11801494 Trifolium pratense
Tp57577_TGAC_v2_gene22681 1.0kb downstream 1.0kb downstream 9379 true Tp57577_TGAC_v2_LG6: 11801495-11810873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 11809874-11810873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 2.0kb upstream 2.0kb upstream 10379 true Tp57577_TGAC_v2_LG6: 11799495-11809873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 11799495-11801494 Trifolium pratense
Tp57577_TGAC_v2_gene22681 2.0kb downstream 2.0kb downstream 10379 true Tp57577_TGAC_v2_LG6: 11801495-11811873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 11809874-11811873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 5.0kb upstream 5.0kb upstream 13379 true Tp57577_TGAC_v2_LG6: 11796495-11809873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 11796495-11801494 Trifolium pratense
Tp57577_TGAC_v2_gene22681 5.0kb downstream 5.0kb downstream 13379 true Tp57577_TGAC_v2_LG6: 11801495-11814873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 11809874-11814873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 10.0kb upstream 10.0kb upstream 18379 true Tp57577_TGAC_v2_LG6: 11791495-11809873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 11791495-11801494 Trifolium pratense
Tp57577_TGAC_v2_gene22681 10.0kb downstream 10.0kb downstream 18379 true Tp57577_TGAC_v2_LG6: 11801495-11819873 Trifolium pratense
Tp57577_TGAC_v2_gene22681 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 11809874-11819873 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303948 5265 Fabidae View MSA
124067886 5270 Rosid View MSA
123737682 5271 Pentapetalae View MSA
122793147 5272 Eudicot View MSA
122041889 5273 Angiosperm View MSA
121345411 5274 Embryophyte View MSA
123426108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain