Gene : Tp57577_TGAC_v2_gene21455 T. pratense v2
Defline:  (1 of 1) K01778 - diaminopimelate epimerase (dapF) Genomic Order:  1264
Name:  ? Tp57577_TGAC_v2_gene21455 Secondary Identifier:  ? PAC:35975712
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5097 Trifolium pratense pathologic  
Tpratense PWY-724 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21455 0.5kb upstream 0.5kb upstream 5741 true Tp57577_TGAC_v2_LG6: 10108914-10114654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 10108914-10109413 Trifolium pratense
Tp57577_TGAC_v2_gene21455 0.5kb downstream 0.5kb downstream 5741 true Tp57577_TGAC_v2_LG6: 10109414-10115154 Trifolium pratense
Tp57577_TGAC_v2_gene21455 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 10114655-10115154 Trifolium pratense
Tp57577_TGAC_v2_gene21455 1.0kb upstream 1.0kb upstream 6241 true Tp57577_TGAC_v2_LG6: 10108414-10114654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 10108414-10109413 Trifolium pratense
Tp57577_TGAC_v2_gene21455 1.0kb downstream 1.0kb downstream 6241 true Tp57577_TGAC_v2_LG6: 10109414-10115654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 10114655-10115654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 2.0kb upstream 2.0kb upstream 7241 true Tp57577_TGAC_v2_LG6: 10107414-10114654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 10107414-10109413 Trifolium pratense
Tp57577_TGAC_v2_gene21455 2.0kb downstream 2.0kb downstream 7241 true Tp57577_TGAC_v2_LG6: 10109414-10116654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 10114655-10116654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 5.0kb upstream 5.0kb upstream 10241 true Tp57577_TGAC_v2_LG6: 10104414-10114654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 10104414-10109413 Trifolium pratense
Tp57577_TGAC_v2_gene21455 5.0kb downstream 5.0kb downstream 10241 true Tp57577_TGAC_v2_LG6: 10109414-10119654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 10114655-10119654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 10.0kb upstream 10.0kb upstream 15241 true Tp57577_TGAC_v2_LG6: 10099414-10114654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 10099414-10109413 Trifolium pratense
Tp57577_TGAC_v2_gene21455 10.0kb downstream 10.0kb downstream 15241 true Tp57577_TGAC_v2_LG6: 10109414-10124654 Trifolium pratense
Tp57577_TGAC_v2_gene21455 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 10114655-10124654 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306016 5265 Fabidae View MSA
124061653 5270 Rosid View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain