Gene : Tp57577_TGAC_v2_gene23406 T. pratense v2
Defline:  (1 of 1) PTHR11945//PTHR11945:SF180 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2572
Name:  ? Tp57577_TGAC_v2_gene23406 Secondary Identifier:  ? PAC:35976043
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23406 0.5kb upstream 0.5kb upstream 3397 true Tp57577_TGAC_v2_LG6: 21999602-22002998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 21999602-22000101 Trifolium pratense
Tp57577_TGAC_v2_gene23406 0.5kb downstream 0.5kb downstream 3397 true Tp57577_TGAC_v2_LG6: 22000102-22003498 Trifolium pratense
Tp57577_TGAC_v2_gene23406 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 22002999-22003498 Trifolium pratense
Tp57577_TGAC_v2_gene23406 1.0kb upstream 1.0kb upstream 3897 true Tp57577_TGAC_v2_LG6: 21999102-22002998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 21999102-22000101 Trifolium pratense
Tp57577_TGAC_v2_gene23406 1.0kb downstream 1.0kb downstream 3897 true Tp57577_TGAC_v2_LG6: 22000102-22003998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 22002999-22003998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 2.0kb upstream 2.0kb upstream 4897 true Tp57577_TGAC_v2_LG6: 21998102-22002998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 21998102-22000101 Trifolium pratense
Tp57577_TGAC_v2_gene23406 2.0kb downstream 2.0kb downstream 4897 true Tp57577_TGAC_v2_LG6: 22000102-22004998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 22002999-22004998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 5.0kb upstream 5.0kb upstream 7897 true Tp57577_TGAC_v2_LG6: 21995102-22002998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 21995102-22000101 Trifolium pratense
Tp57577_TGAC_v2_gene23406 5.0kb downstream 5.0kb downstream 7897 true Tp57577_TGAC_v2_LG6: 22000102-22007998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 22002999-22007998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 10.0kb upstream 10.0kb upstream 12897 true Tp57577_TGAC_v2_LG6: 21990102-22002998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 21990102-22000101 Trifolium pratense
Tp57577_TGAC_v2_gene23406 10.0kb downstream 10.0kb downstream 12897 true Tp57577_TGAC_v2_LG6: 22000102-22012998 Trifolium pratense
Tp57577_TGAC_v2_gene23406 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 22002999-22012998 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122314774 5265 Fabidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain