Gene : Tp57577_TGAC_v2_gene23316 T. pratense v2
Defline:  (1 of 20) PF08659 - KR domain (KR) Genomic Order:  310
Name:  ? Tp57577_TGAC_v2_gene23316 Secondary Identifier:  ? PAC:35974759
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5466 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23316 0.5kb upstream 0.5kb upstream 2568 true Tp57577_TGAC_v2_LG6: 2442650-2445217 Trifolium pratense
Tp57577_TGAC_v2_gene23316 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 2444718-2445217 Trifolium pratense
Tp57577_TGAC_v2_gene23316 0.5kb downstream 0.5kb downstream 2568 true Tp57577_TGAC_v2_LG6: 2442150-2444717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 2442150-2442649 Trifolium pratense
Tp57577_TGAC_v2_gene23316 1.0kb upstream 1.0kb upstream 3068 true Tp57577_TGAC_v2_LG6: 2442650-2445717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 2444718-2445717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 1.0kb downstream 1.0kb downstream 3068 true Tp57577_TGAC_v2_LG6: 2441650-2444717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 2441650-2442649 Trifolium pratense
Tp57577_TGAC_v2_gene23316 2.0kb upstream 2.0kb upstream 4068 true Tp57577_TGAC_v2_LG6: 2442650-2446717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 2444718-2446717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 2.0kb downstream 2.0kb downstream 4068 true Tp57577_TGAC_v2_LG6: 2440650-2444717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 2440650-2442649 Trifolium pratense
Tp57577_TGAC_v2_gene23316 5.0kb upstream 5.0kb upstream 7068 true Tp57577_TGAC_v2_LG6: 2442650-2449717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 2444718-2449717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 5.0kb downstream 5.0kb downstream 7068 true Tp57577_TGAC_v2_LG6: 2437650-2444717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 2437650-2442649 Trifolium pratense
Tp57577_TGAC_v2_gene23316 10.0kb upstream 10.0kb upstream 12068 true Tp57577_TGAC_v2_LG6: 2442650-2454717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 2444718-2454717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 10.0kb downstream 10.0kb downstream 12068 true Tp57577_TGAC_v2_LG6: 2432650-2444717 Trifolium pratense
Tp57577_TGAC_v2_gene23316 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 2432650-2442649 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299359 5265 Fabidae View MSA
124070564 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain