Gene : Tp57577_TGAC_v2_gene23340 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  289
Name:  ? Tp57577_TGAC_v2_gene23340 Secondary Identifier:  ? PAC:35974512
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23340 0.5kb upstream 0.5kb upstream 2744 true Tp57577_TGAC_v2_LG6: 2265078-2267821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 2265078-2265577 Trifolium pratense
Tp57577_TGAC_v2_gene23340 0.5kb downstream 0.5kb downstream 2744 true Tp57577_TGAC_v2_LG6: 2265578-2268321 Trifolium pratense
Tp57577_TGAC_v2_gene23340 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 2267822-2268321 Trifolium pratense
Tp57577_TGAC_v2_gene23340 1.0kb upstream 1.0kb upstream 3244 true Tp57577_TGAC_v2_LG6: 2264578-2267821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 2264578-2265577 Trifolium pratense
Tp57577_TGAC_v2_gene23340 1.0kb downstream 1.0kb downstream 3244 true Tp57577_TGAC_v2_LG6: 2265578-2268821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 2267822-2268821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 2.0kb upstream 2.0kb upstream 4244 true Tp57577_TGAC_v2_LG6: 2263578-2267821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 2263578-2265577 Trifolium pratense
Tp57577_TGAC_v2_gene23340 2.0kb downstream 2.0kb downstream 4244 true Tp57577_TGAC_v2_LG6: 2265578-2269821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 2267822-2269821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 5.0kb upstream 5.0kb upstream 7244 true Tp57577_TGAC_v2_LG6: 2260578-2267821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 2260578-2265577 Trifolium pratense
Tp57577_TGAC_v2_gene23340 5.0kb downstream 5.0kb downstream 7244 true Tp57577_TGAC_v2_LG6: 2265578-2272821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 2267822-2272821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 10.0kb upstream 10.0kb upstream 12244 true Tp57577_TGAC_v2_LG6: 2255578-2267821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 2255578-2265577 Trifolium pratense
Tp57577_TGAC_v2_gene23340 10.0kb downstream 10.0kb downstream 12244 true Tp57577_TGAC_v2_LG6: 2265578-2277821 Trifolium pratense
Tp57577_TGAC_v2_gene23340 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 2267822-2277821 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305180 5265 Fabidae View MSA
124067728 5270 Rosid View MSA
123742188 5271 Pentapetalae View MSA
122792936 5272 Eudicot View MSA
122045505 5273 Angiosperm View MSA
121310455 5274 Embryophyte View MSA
123347933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain