Gene : Tp57577_TGAC_v2_gene24330 T. pratense v2
Defline:  (1 of 2) K06125 - 4-hydroxybenzoate polyprenyltransferase (COQ2) Genomic Order:  1429
Name:  ? Tp57577_TGAC_v2_gene24330 Secondary Identifier:  ? PAC:35975890
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5871 Trifolium pratense pathologic  
Tpratense PWY-5872 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24330 0.5kb upstream 0.5kb upstream 3135 true Tp57577_TGAC_v2_LG6: 11681473-11684607 Trifolium pratense
Tp57577_TGAC_v2_gene24330 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 11684108-11684607 Trifolium pratense
Tp57577_TGAC_v2_gene24330 0.5kb downstream 0.5kb downstream 3135 true Tp57577_TGAC_v2_LG6: 11680973-11684107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 11680973-11681472 Trifolium pratense
Tp57577_TGAC_v2_gene24330 1.0kb upstream 1.0kb upstream 3635 true Tp57577_TGAC_v2_LG6: 11681473-11685107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 11684108-11685107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 1.0kb downstream 1.0kb downstream 3635 true Tp57577_TGAC_v2_LG6: 11680473-11684107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 11680473-11681472 Trifolium pratense
Tp57577_TGAC_v2_gene24330 2.0kb upstream 2.0kb upstream 4635 true Tp57577_TGAC_v2_LG6: 11681473-11686107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 11684108-11686107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 2.0kb downstream 2.0kb downstream 4635 true Tp57577_TGAC_v2_LG6: 11679473-11684107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 11679473-11681472 Trifolium pratense
Tp57577_TGAC_v2_gene24330 5.0kb upstream 5.0kb upstream 7635 true Tp57577_TGAC_v2_LG6: 11681473-11689107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 11684108-11689107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 5.0kb downstream 5.0kb downstream 7635 true Tp57577_TGAC_v2_LG6: 11676473-11684107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 11676473-11681472 Trifolium pratense
Tp57577_TGAC_v2_gene24330 10.0kb upstream 10.0kb upstream 12635 true Tp57577_TGAC_v2_LG6: 11681473-11694107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 11684108-11694107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 10.0kb downstream 10.0kb downstream 12635 true Tp57577_TGAC_v2_LG6: 11671473-11684107 Trifolium pratense
Tp57577_TGAC_v2_gene24330 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 11671473-11681472 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316392 5265 Fabidae View MSA
124066892 5270 Rosid View MSA
123737843 5271 Pentapetalae View MSA
122788354 5272 Eudicot View MSA
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain