Gene : Tp57577_TGAC_v2_gene24486 T. pratense v2

Defline:  (1 of 1) PTHR12802:SF39 - SWI/SNF COMPLEX SUBUNIT SWI3D Genomic Order:  2538
Name:  ? Tp57577_TGAC_v2_gene24486 Secondary Identifier:  ? PAC:35975395

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24486 0.5kb upstream 0.5kb upstream 8557 true Tp57577_TGAC_v2_LG6: 21748116-21756672 Trifolium pratense
Tp57577_TGAC_v2_gene24486 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 21756173-21756672 Trifolium pratense
Tp57577_TGAC_v2_gene24486 0.5kb downstream 0.5kb downstream 8557 true Tp57577_TGAC_v2_LG6: 21747616-21756172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 21747616-21748115 Trifolium pratense
Tp57577_TGAC_v2_gene24486 1.0kb upstream 1.0kb upstream 9057 true Tp57577_TGAC_v2_LG6: 21748116-21757172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 21756173-21757172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 1.0kb downstream 1.0kb downstream 9057 true Tp57577_TGAC_v2_LG6: 21747116-21756172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 21747116-21748115 Trifolium pratense
Tp57577_TGAC_v2_gene24486 2.0kb upstream 2.0kb upstream 10057 true Tp57577_TGAC_v2_LG6: 21748116-21758172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 21756173-21758172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 2.0kb downstream 2.0kb downstream 10057 true Tp57577_TGAC_v2_LG6: 21746116-21756172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 21746116-21748115 Trifolium pratense
Tp57577_TGAC_v2_gene24486 5.0kb upstream 5.0kb upstream 13057 true Tp57577_TGAC_v2_LG6: 21748116-21761172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 21756173-21761172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 5.0kb downstream 5.0kb downstream 13057 true Tp57577_TGAC_v2_LG6: 21743116-21756172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 21743116-21748115 Trifolium pratense
Tp57577_TGAC_v2_gene24486 10.0kb upstream 10.0kb upstream 18057 true Tp57577_TGAC_v2_LG6: 21748116-21766172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 21756173-21766172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 10.0kb downstream 10.0kb downstream 18057 true Tp57577_TGAC_v2_LG6: 21738116-21756172 Trifolium pratense
Tp57577_TGAC_v2_gene24486 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 21738116-21748115 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304014 5265 Fabidae View MSA
124063098 5270 Rosid View MSA
123749102 5271 Pentapetalae View MSA
122792303 5272 Eudicot View MSA
122043104 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain