Gene : Tp57577_TGAC_v2_gene32296 T. pratense v2

Defline:  (1 of 2) K02989 - small subunit ribosomal protein S5e (RP-S5e, RPS5) Genomic Order:  988
Name:  ? Tp57577_TGAC_v2_gene32296 Secondary Identifier:  ? PAC:35974420

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32296 0.5kb upstream 0.5kb upstream 2552 true Tp57577_TGAC_v2_LG6: 7607073-7609624 Trifolium pratense
Tp57577_TGAC_v2_gene32296 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 7609125-7609624 Trifolium pratense
Tp57577_TGAC_v2_gene32296 0.5kb downstream 0.5kb downstream 2552 true Tp57577_TGAC_v2_LG6: 7606573-7609124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 7606573-7607072 Trifolium pratense
Tp57577_TGAC_v2_gene32296 1.0kb upstream 1.0kb upstream 3052 true Tp57577_TGAC_v2_LG6: 7607073-7610124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 7609125-7610124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 1.0kb downstream 1.0kb downstream 3052 true Tp57577_TGAC_v2_LG6: 7606073-7609124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 7606073-7607072 Trifolium pratense
Tp57577_TGAC_v2_gene32296 2.0kb upstream 2.0kb upstream 4052 true Tp57577_TGAC_v2_LG6: 7607073-7611124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 7609125-7611124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 2.0kb downstream 2.0kb downstream 4052 true Tp57577_TGAC_v2_LG6: 7605073-7609124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 7605073-7607072 Trifolium pratense
Tp57577_TGAC_v2_gene32296 5.0kb upstream 5.0kb upstream 7052 true Tp57577_TGAC_v2_LG6: 7607073-7614124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 7609125-7614124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 5.0kb downstream 5.0kb downstream 7052 true Tp57577_TGAC_v2_LG6: 7602073-7609124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 7602073-7607072 Trifolium pratense
Tp57577_TGAC_v2_gene32296 10.0kb upstream 10.0kb upstream 12052 true Tp57577_TGAC_v2_LG6: 7607073-7619124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 7609125-7619124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 10.0kb downstream 10.0kb downstream 12052 true Tp57577_TGAC_v2_LG6: 7597073-7609124 Trifolium pratense
Tp57577_TGAC_v2_gene32296 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 7597073-7607072 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311840 5265 Fabidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain