Gene : Tp57577_TGAC_v2_gene32306 T. pratense v2
Defline:  (1 of 1) K04716 - sphingosine-1-phosphate phosphatase 1 (SGPP1) Genomic Order:  986
Name:  ? Tp57577_TGAC_v2_gene32306 Secondary Identifier:  ? PAC:35975949
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRIGLSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32306 0.5kb upstream 0.5kb upstream 5747 true Tp57577_TGAC_v2_LG6: 7591415-7597161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 7591415-7591914 Trifolium pratense
Tp57577_TGAC_v2_gene32306 0.5kb downstream 0.5kb downstream 5747 true Tp57577_TGAC_v2_LG6: 7591915-7597661 Trifolium pratense
Tp57577_TGAC_v2_gene32306 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 7597162-7597661 Trifolium pratense
Tp57577_TGAC_v2_gene32306 1.0kb upstream 1.0kb upstream 6247 true Tp57577_TGAC_v2_LG6: 7590915-7597161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 7590915-7591914 Trifolium pratense
Tp57577_TGAC_v2_gene32306 1.0kb downstream 1.0kb downstream 6247 true Tp57577_TGAC_v2_LG6: 7591915-7598161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 7597162-7598161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 2.0kb upstream 2.0kb upstream 7247 true Tp57577_TGAC_v2_LG6: 7589915-7597161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 7589915-7591914 Trifolium pratense
Tp57577_TGAC_v2_gene32306 2.0kb downstream 2.0kb downstream 7247 true Tp57577_TGAC_v2_LG6: 7591915-7599161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 7597162-7599161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 5.0kb upstream 5.0kb upstream 10247 true Tp57577_TGAC_v2_LG6: 7586915-7597161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 7586915-7591914 Trifolium pratense
Tp57577_TGAC_v2_gene32306 5.0kb downstream 5.0kb downstream 10247 true Tp57577_TGAC_v2_LG6: 7591915-7602161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 7597162-7602161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 10.0kb upstream 10.0kb upstream 15247 true Tp57577_TGAC_v2_LG6: 7581915-7597161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 7581915-7591914 Trifolium pratense
Tp57577_TGAC_v2_gene32306 10.0kb downstream 10.0kb downstream 15247 true Tp57577_TGAC_v2_LG6: 7591915-7607161 Trifolium pratense
Tp57577_TGAC_v2_gene32306 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 7597162-7607161 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309105 5265 Fabidae View MSA
124061101 5270 Rosid View MSA
123739708 5271 Pentapetalae View MSA
122787223 5272 Eudicot View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain