Gene : Tp57577_TGAC_v2_gene30344 T. pratense v2
Defline:  (1 of 2) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  1797
Name:  ? Tp57577_TGAC_v2_gene30344 Secondary Identifier:  ? PAC:35974667
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense BRANCHED-CHAIN-AA-SYN-PWY Trifolium pratense pathologic  
Tpratense ILEUSYN-PWY Trifolium pratense pathologic  
Tpratense PWY-3001 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30344 0.5kb upstream 0.5kb upstream 7767 true Tp57577_TGAC_v2_LG6: 15364588-15372354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 15364588-15365087 Trifolium pratense
Tp57577_TGAC_v2_gene30344 0.5kb downstream 0.5kb downstream 7767 true Tp57577_TGAC_v2_LG6: 15365088-15372854 Trifolium pratense
Tp57577_TGAC_v2_gene30344 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 15372355-15372854 Trifolium pratense
Tp57577_TGAC_v2_gene30344 1.0kb upstream 1.0kb upstream 8267 true Tp57577_TGAC_v2_LG6: 15364088-15372354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 15364088-15365087 Trifolium pratense
Tp57577_TGAC_v2_gene30344 1.0kb downstream 1.0kb downstream 8267 true Tp57577_TGAC_v2_LG6: 15365088-15373354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 15372355-15373354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 2.0kb upstream 2.0kb upstream 9267 true Tp57577_TGAC_v2_LG6: 15363088-15372354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 15363088-15365087 Trifolium pratense
Tp57577_TGAC_v2_gene30344 2.0kb downstream 2.0kb downstream 9267 true Tp57577_TGAC_v2_LG6: 15365088-15374354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 15372355-15374354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 5.0kb upstream 5.0kb upstream 12267 true Tp57577_TGAC_v2_LG6: 15360088-15372354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 15360088-15365087 Trifolium pratense
Tp57577_TGAC_v2_gene30344 5.0kb downstream 5.0kb downstream 12267 true Tp57577_TGAC_v2_LG6: 15365088-15377354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 15372355-15377354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 10.0kb upstream 10.0kb upstream 17267 true Tp57577_TGAC_v2_LG6: 15355088-15372354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 15355088-15365087 Trifolium pratense
Tp57577_TGAC_v2_gene30344 10.0kb downstream 10.0kb downstream 17267 true Tp57577_TGAC_v2_LG6: 15365088-15382354 Trifolium pratense
Tp57577_TGAC_v2_gene30344 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 15372355-15382354 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122301821 5265 Fabidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain