Gene : Tp57577_TGAC_v2_gene31024 T. pratense v2
Defline:  (1 of 2) PTHR22870:SF175 - ANKYRIN REPEAT AND REGULATOR OF CHROMOSOME CONDENSATION (RCC1) DOMAIN-CONTAINING PROTEIN Genomic Order:  1694
Name:  ? Tp57577_TGAC_v2_gene31024 Secondary Identifier:  ? PAC:35975171
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31024 0.5kb upstream 0.5kb upstream 7604 true Tp57577_TGAC_v2_LG6: 14228352-14235955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 14228352-14228851 Trifolium pratense
Tp57577_TGAC_v2_gene31024 0.5kb downstream 0.5kb downstream 7604 true Tp57577_TGAC_v2_LG6: 14228852-14236455 Trifolium pratense
Tp57577_TGAC_v2_gene31024 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 14235956-14236455 Trifolium pratense
Tp57577_TGAC_v2_gene31024 1.0kb upstream 1.0kb upstream 8104 true Tp57577_TGAC_v2_LG6: 14227852-14235955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 14227852-14228851 Trifolium pratense
Tp57577_TGAC_v2_gene31024 1.0kb downstream 1.0kb downstream 8104 true Tp57577_TGAC_v2_LG6: 14228852-14236955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 14235956-14236955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 2.0kb upstream 2.0kb upstream 9104 true Tp57577_TGAC_v2_LG6: 14226852-14235955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 14226852-14228851 Trifolium pratense
Tp57577_TGAC_v2_gene31024 2.0kb downstream 2.0kb downstream 9104 true Tp57577_TGAC_v2_LG6: 14228852-14237955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 14235956-14237955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 5.0kb upstream 5.0kb upstream 12104 true Tp57577_TGAC_v2_LG6: 14223852-14235955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 14223852-14228851 Trifolium pratense
Tp57577_TGAC_v2_gene31024 5.0kb downstream 5.0kb downstream 12104 true Tp57577_TGAC_v2_LG6: 14228852-14240955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 14235956-14240955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 10.0kb upstream 10.0kb upstream 17104 true Tp57577_TGAC_v2_LG6: 14218852-14235955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 14218852-14228851 Trifolium pratense
Tp57577_TGAC_v2_gene31024 10.0kb downstream 10.0kb downstream 17104 true Tp57577_TGAC_v2_LG6: 14228852-14245955 Trifolium pratense
Tp57577_TGAC_v2_gene31024 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 14235956-14245955 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301338 5265 Fabidae View MSA
124061944 5270 Rosid View MSA
123736437 5271 Pentapetalae View MSA
122786793 5272 Eudicot View MSA
122044253 5273 Angiosperm View MSA
121345534 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain