Gene : Tp57577_TGAC_v2_gene31498 T. pratense v2
Defline:  (1 of 3) PTHR11062//PTHR11062:SF66 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  424
Name:  ? Tp57577_TGAC_v2_gene31498 Secondary Identifier:  ? PAC:35973931
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5980 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31498 0.5kb upstream 0.5kb upstream 5184 true Tp57577_TGAC_v2_LG6: 3364096-3369279 Trifolium pratense
Tp57577_TGAC_v2_gene31498 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 3368780-3369279 Trifolium pratense
Tp57577_TGAC_v2_gene31498 0.5kb downstream 0.5kb downstream 5184 true Tp57577_TGAC_v2_LG6: 3363596-3368779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 3363596-3364095 Trifolium pratense
Tp57577_TGAC_v2_gene31498 1.0kb upstream 1.0kb upstream 5684 true Tp57577_TGAC_v2_LG6: 3364096-3369779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 3368780-3369779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 1.0kb downstream 1.0kb downstream 5684 true Tp57577_TGAC_v2_LG6: 3363096-3368779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 3363096-3364095 Trifolium pratense
Tp57577_TGAC_v2_gene31498 2.0kb upstream 2.0kb upstream 6684 true Tp57577_TGAC_v2_LG6: 3364096-3370779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 3368780-3370779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 2.0kb downstream 2.0kb downstream 6684 true Tp57577_TGAC_v2_LG6: 3362096-3368779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 3362096-3364095 Trifolium pratense
Tp57577_TGAC_v2_gene31498 5.0kb upstream 5.0kb upstream 9684 true Tp57577_TGAC_v2_LG6: 3364096-3373779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 3368780-3373779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 5.0kb downstream 5.0kb downstream 9684 true Tp57577_TGAC_v2_LG6: 3359096-3368779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 3359096-3364095 Trifolium pratense
Tp57577_TGAC_v2_gene31498 10.0kb upstream 10.0kb upstream 14684 true Tp57577_TGAC_v2_LG6: 3364096-3378779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 3368780-3378779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 10.0kb downstream 10.0kb downstream 14684 true Tp57577_TGAC_v2_LG6: 3354096-3368779 Trifolium pratense
Tp57577_TGAC_v2_gene31498 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 3354096-3364095 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313777 5265 Fabidae View MSA
124070625 5270 Rosid View MSA
123746709 5271 Pentapetalae View MSA
122795318 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain