Gene : Tp57577_TGAC_v2_gene33481 T. pratense v2
Defline:  (1 of 1) PTHR10357//PTHR10357:SF157 - ALPHA-AMYLASE // SUBFAMILY NOT NAMED Genomic Order:  2284
Name:  ? Tp57577_TGAC_v2_gene33481 Secondary Identifier:  ? PAC:35975287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33481 0.5kb upstream 0.5kb upstream 11865 true Tp57577_TGAC_v2_LG6: 19596882-19608746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 19596882-19597381 Trifolium pratense
Tp57577_TGAC_v2_gene33481 0.5kb downstream 0.5kb downstream 11865 true Tp57577_TGAC_v2_LG6: 19597382-19609246 Trifolium pratense
Tp57577_TGAC_v2_gene33481 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 19608747-19609246 Trifolium pratense
Tp57577_TGAC_v2_gene33481 1.0kb upstream 1.0kb upstream 12365 true Tp57577_TGAC_v2_LG6: 19596382-19608746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 19596382-19597381 Trifolium pratense
Tp57577_TGAC_v2_gene33481 1.0kb downstream 1.0kb downstream 12365 true Tp57577_TGAC_v2_LG6: 19597382-19609746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 19608747-19609746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 2.0kb upstream 2.0kb upstream 13365 true Tp57577_TGAC_v2_LG6: 19595382-19608746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 19595382-19597381 Trifolium pratense
Tp57577_TGAC_v2_gene33481 2.0kb downstream 2.0kb downstream 13365 true Tp57577_TGAC_v2_LG6: 19597382-19610746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 19608747-19610746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 5.0kb upstream 5.0kb upstream 16365 true Tp57577_TGAC_v2_LG6: 19592382-19608746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 19592382-19597381 Trifolium pratense
Tp57577_TGAC_v2_gene33481 5.0kb downstream 5.0kb downstream 16365 true Tp57577_TGAC_v2_LG6: 19597382-19613746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 19608747-19613746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 10.0kb upstream 10.0kb upstream 21365 true Tp57577_TGAC_v2_LG6: 19587382-19608746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 19587382-19597381 Trifolium pratense
Tp57577_TGAC_v2_gene33481 10.0kb downstream 10.0kb downstream 21365 true Tp57577_TGAC_v2_LG6: 19597382-19618746 Trifolium pratense
Tp57577_TGAC_v2_gene33481 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 19608747-19618746 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301333 5265 Fabidae View MSA
124070073 5270 Rosid View MSA
123751733 5271 Pentapetalae View MSA
122785800 5272 Eudicot View MSA
122050125 5273 Angiosperm View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain