Gene : Tp57577_TGAC_v2_gene33412 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2320
Name:  ? Tp57577_TGAC_v2_gene33412 Secondary Identifier:  ? PAC:35974614
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33412 0.5kb upstream 0.5kb upstream 6549 true Tp57577_TGAC_v2_LG6: 19822673-19829221 Trifolium pratense
Tp57577_TGAC_v2_gene33412 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 19828722-19829221 Trifolium pratense
Tp57577_TGAC_v2_gene33412 0.5kb downstream 0.5kb downstream 6549 true Tp57577_TGAC_v2_LG6: 19822173-19828721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 19822173-19822672 Trifolium pratense
Tp57577_TGAC_v2_gene33412 1.0kb upstream 1.0kb upstream 7049 true Tp57577_TGAC_v2_LG6: 19822673-19829721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 19828722-19829721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 1.0kb downstream 1.0kb downstream 7049 true Tp57577_TGAC_v2_LG6: 19821673-19828721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 19821673-19822672 Trifolium pratense
Tp57577_TGAC_v2_gene33412 2.0kb upstream 2.0kb upstream 8049 true Tp57577_TGAC_v2_LG6: 19822673-19830721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 19828722-19830721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 2.0kb downstream 2.0kb downstream 8049 true Tp57577_TGAC_v2_LG6: 19820673-19828721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 19820673-19822672 Trifolium pratense
Tp57577_TGAC_v2_gene33412 5.0kb upstream 5.0kb upstream 11049 true Tp57577_TGAC_v2_LG6: 19822673-19833721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 19828722-19833721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 5.0kb downstream 5.0kb downstream 11049 true Tp57577_TGAC_v2_LG6: 19817673-19828721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 19817673-19822672 Trifolium pratense
Tp57577_TGAC_v2_gene33412 10.0kb upstream 10.0kb upstream 16049 true Tp57577_TGAC_v2_LG6: 19822673-19838721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 19828722-19838721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 10.0kb downstream 10.0kb downstream 16049 true Tp57577_TGAC_v2_LG6: 19812673-19828721 Trifolium pratense
Tp57577_TGAC_v2_gene33412 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 19812673-19822672 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308376 5265 Fabidae View MSA
124065007 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain