Gene : Tp57577_TGAC_v2_gene39076 T. pratense v2
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2180
Name:  ? Tp57577_TGAC_v2_gene39076 Secondary Identifier:  ? PAC:35975779
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39076 0.5kb upstream 0.5kb upstream 2266 true Tp57577_TGAC_v2_LG6: 18743818-18746083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 18743818-18744317 Trifolium pratense
Tp57577_TGAC_v2_gene39076 0.5kb downstream 0.5kb downstream 2266 true Tp57577_TGAC_v2_LG6: 18744318-18746583 Trifolium pratense
Tp57577_TGAC_v2_gene39076 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 18746084-18746583 Trifolium pratense
Tp57577_TGAC_v2_gene39076 1.0kb upstream 1.0kb upstream 2766 true Tp57577_TGAC_v2_LG6: 18743318-18746083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 18743318-18744317 Trifolium pratense
Tp57577_TGAC_v2_gene39076 1.0kb downstream 1.0kb downstream 2766 true Tp57577_TGAC_v2_LG6: 18744318-18747083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 18746084-18747083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 2.0kb upstream 2.0kb upstream 3766 true Tp57577_TGAC_v2_LG6: 18742318-18746083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 18742318-18744317 Trifolium pratense
Tp57577_TGAC_v2_gene39076 2.0kb downstream 2.0kb downstream 3766 true Tp57577_TGAC_v2_LG6: 18744318-18748083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 18746084-18748083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 5.0kb upstream 5.0kb upstream 6766 true Tp57577_TGAC_v2_LG6: 18739318-18746083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 18739318-18744317 Trifolium pratense
Tp57577_TGAC_v2_gene39076 5.0kb downstream 5.0kb downstream 6766 true Tp57577_TGAC_v2_LG6: 18744318-18751083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 18746084-18751083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 10.0kb upstream 10.0kb upstream 11766 true Tp57577_TGAC_v2_LG6: 18734318-18746083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 18734318-18744317 Trifolium pratense
Tp57577_TGAC_v2_gene39076 10.0kb downstream 10.0kb downstream 11766 true Tp57577_TGAC_v2_LG6: 18744318-18756083 Trifolium pratense
Tp57577_TGAC_v2_gene39076 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 18746084-18756083 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305000 5265 Fabidae View MSA
124068304 5270 Rosid View MSA
123739380 5271 Pentapetalae View MSA
122792095 5272 Eudicot View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain