Gene : Tp57577_TGAC_v2_gene39121 T. pratense v2

Genomic Order:  2112 Name:  ? Tp57577_TGAC_v2_gene39121
Secondary Identifier:  ? PAC:35975809

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39121 0.5kb upstream 0.5kb upstream 5339 true Tp57577_TGAC_v2_LG6: 18148716-18154054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 18148716-18149215 Trifolium pratense
Tp57577_TGAC_v2_gene39121 0.5kb downstream 0.5kb downstream 5339 true Tp57577_TGAC_v2_LG6: 18149216-18154554 Trifolium pratense
Tp57577_TGAC_v2_gene39121 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 18154055-18154554 Trifolium pratense
Tp57577_TGAC_v2_gene39121 1.0kb upstream 1.0kb upstream 5839 true Tp57577_TGAC_v2_LG6: 18148216-18154054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 18148216-18149215 Trifolium pratense
Tp57577_TGAC_v2_gene39121 1.0kb downstream 1.0kb downstream 5839 true Tp57577_TGAC_v2_LG6: 18149216-18155054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 18154055-18155054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 2.0kb upstream 2.0kb upstream 6839 true Tp57577_TGAC_v2_LG6: 18147216-18154054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 18147216-18149215 Trifolium pratense
Tp57577_TGAC_v2_gene39121 2.0kb downstream 2.0kb downstream 6839 true Tp57577_TGAC_v2_LG6: 18149216-18156054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 18154055-18156054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 5.0kb upstream 5.0kb upstream 9839 true Tp57577_TGAC_v2_LG6: 18144216-18154054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 18144216-18149215 Trifolium pratense
Tp57577_TGAC_v2_gene39121 5.0kb downstream 5.0kb downstream 9839 true Tp57577_TGAC_v2_LG6: 18149216-18159054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 18154055-18159054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 10.0kb upstream 10.0kb upstream 14839 true Tp57577_TGAC_v2_LG6: 18139216-18154054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 18139216-18149215 Trifolium pratense
Tp57577_TGAC_v2_gene39121 10.0kb downstream 10.0kb downstream 14839 true Tp57577_TGAC_v2_LG6: 18149216-18164054 Trifolium pratense
Tp57577_TGAC_v2_gene39121 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 18154055-18164054 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026351 5273 Angiosperm View MSA
122305672 5265 Fabidae View MSA
124037199 5270 Rosid View MSA
123745496 5271 Pentapetalae View MSA
122786734 5272 Eudicot View MSA
121296290 5274 Embryophyte View MSA
123334480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain