Gene : Tp57577_TGAC_v2_gene39120 T. pratense v2
Defline:  (1 of 3) PTHR15907:SF35 - GENE1000 PROTEIN-RELATED Genomic Order:  2163
Name:  ? Tp57577_TGAC_v2_gene39120 Secondary Identifier:  ? PAC:35975042
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39120 0.5kb upstream 0.5kb upstream 5482 true Tp57577_TGAC_v2_LG6: 18622466-18627947 Trifolium pratense
Tp57577_TGAC_v2_gene39120 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 18627448-18627947 Trifolium pratense
Tp57577_TGAC_v2_gene39120 0.5kb downstream 0.5kb downstream 5482 true Tp57577_TGAC_v2_LG6: 18621966-18627447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 18621966-18622465 Trifolium pratense
Tp57577_TGAC_v2_gene39120 1.0kb upstream 1.0kb upstream 5982 true Tp57577_TGAC_v2_LG6: 18622466-18628447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 18627448-18628447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 1.0kb downstream 1.0kb downstream 5982 true Tp57577_TGAC_v2_LG6: 18621466-18627447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 18621466-18622465 Trifolium pratense
Tp57577_TGAC_v2_gene39120 2.0kb upstream 2.0kb upstream 6982 true Tp57577_TGAC_v2_LG6: 18622466-18629447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 18627448-18629447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 2.0kb downstream 2.0kb downstream 6982 true Tp57577_TGAC_v2_LG6: 18620466-18627447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 18620466-18622465 Trifolium pratense
Tp57577_TGAC_v2_gene39120 5.0kb upstream 5.0kb upstream 9982 true Tp57577_TGAC_v2_LG6: 18622466-18632447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 18627448-18632447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 5.0kb downstream 5.0kb downstream 9982 true Tp57577_TGAC_v2_LG6: 18617466-18627447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 18617466-18622465 Trifolium pratense
Tp57577_TGAC_v2_gene39120 10.0kb upstream 10.0kb upstream 14982 true Tp57577_TGAC_v2_LG6: 18622466-18637447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 18627448-18637447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 10.0kb downstream 10.0kb downstream 14982 true Tp57577_TGAC_v2_LG6: 18612466-18627447 Trifolium pratense
Tp57577_TGAC_v2_gene39120 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 18612466-18622465 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311912 5265 Fabidae View MSA
124071664 5270 Rosid View MSA
123743444 5271 Pentapetalae View MSA
122790372 5272 Eudicot View MSA
122043074 5273 Angiosperm View MSA
123429155 5275 Viridiplantae View MSA
121346562 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain