Gene : Tp57577_TGAC_v2_gene39134 T. pratense v2
Defline:  (1 of 10) PF00176//PF00271 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) Genomic Order:  2169
Name:  ? Tp57577_TGAC_v2_gene39134 Secondary Identifier:  ? PAC:35975508
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39134 0.5kb upstream 0.5kb upstream 10669 true Tp57577_TGAC_v2_LG6: 18662598-18673266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 18662598-18663097 Trifolium pratense
Tp57577_TGAC_v2_gene39134 0.5kb downstream 0.5kb downstream 10669 true Tp57577_TGAC_v2_LG6: 18663098-18673766 Trifolium pratense
Tp57577_TGAC_v2_gene39134 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 18673267-18673766 Trifolium pratense
Tp57577_TGAC_v2_gene39134 1.0kb upstream 1.0kb upstream 11169 true Tp57577_TGAC_v2_LG6: 18662098-18673266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 18662098-18663097 Trifolium pratense
Tp57577_TGAC_v2_gene39134 1.0kb downstream 1.0kb downstream 11169 true Tp57577_TGAC_v2_LG6: 18663098-18674266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 18673267-18674266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 2.0kb upstream 2.0kb upstream 12169 true Tp57577_TGAC_v2_LG6: 18661098-18673266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 18661098-18663097 Trifolium pratense
Tp57577_TGAC_v2_gene39134 2.0kb downstream 2.0kb downstream 12169 true Tp57577_TGAC_v2_LG6: 18663098-18675266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 18673267-18675266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 5.0kb upstream 5.0kb upstream 15169 true Tp57577_TGAC_v2_LG6: 18658098-18673266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 18658098-18663097 Trifolium pratense
Tp57577_TGAC_v2_gene39134 5.0kb downstream 5.0kb downstream 15169 true Tp57577_TGAC_v2_LG6: 18663098-18678266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 18673267-18678266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 10.0kb upstream 10.0kb upstream 20169 true Tp57577_TGAC_v2_LG6: 18653098-18673266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 18653098-18663097 Trifolium pratense
Tp57577_TGAC_v2_gene39134 10.0kb downstream 10.0kb downstream 20169 true Tp57577_TGAC_v2_LG6: 18663098-18683266 Trifolium pratense
Tp57577_TGAC_v2_gene39134 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 18673267-18683266 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026277 5273 Angiosperm View MSA
122309224 5265 Fabidae View MSA
124063375 5270 Rosid View MSA
123740269 5271 Pentapetalae View MSA
122792604 5272 Eudicot View MSA
121347907 5274 Embryophyte View MSA
123380672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain