Gene : Tp57577_TGAC_v2_gene3856 T. pratense v2
Defline:  (1 of 9) PTHR21495:SF59 - DIRIGENT PROTEIN 20-RELATED Genomic Order:  2020
Name:  ? Tp57577_TGAC_v2_gene3856 Secondary Identifier:  ? PAC:35974209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3856 0.5kb upstream 0.5kb upstream 1160 true Tp57577_TGAC_v2_LG6: 17348475-17349634 Trifolium pratense
Tp57577_TGAC_v2_gene3856 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 17349135-17349634 Trifolium pratense
Tp57577_TGAC_v2_gene3856 0.5kb downstream 0.5kb downstream 1160 true Tp57577_TGAC_v2_LG6: 17347975-17349134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 17347975-17348474 Trifolium pratense
Tp57577_TGAC_v2_gene3856 1.0kb upstream 1.0kb upstream 1660 true Tp57577_TGAC_v2_LG6: 17348475-17350134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 17349135-17350134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 1.0kb downstream 1.0kb downstream 1660 true Tp57577_TGAC_v2_LG6: 17347475-17349134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 17347475-17348474 Trifolium pratense
Tp57577_TGAC_v2_gene3856 2.0kb upstream 2.0kb upstream 2660 true Tp57577_TGAC_v2_LG6: 17348475-17351134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 17349135-17351134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 2.0kb downstream 2.0kb downstream 2660 true Tp57577_TGAC_v2_LG6: 17346475-17349134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 17346475-17348474 Trifolium pratense
Tp57577_TGAC_v2_gene3856 5.0kb upstream 5.0kb upstream 5660 true Tp57577_TGAC_v2_LG6: 17348475-17354134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 17349135-17354134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 5.0kb downstream 5.0kb downstream 5660 true Tp57577_TGAC_v2_LG6: 17343475-17349134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 17343475-17348474 Trifolium pratense
Tp57577_TGAC_v2_gene3856 10.0kb upstream 10.0kb upstream 10660 true Tp57577_TGAC_v2_LG6: 17348475-17359134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 17349135-17359134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 10.0kb downstream 10.0kb downstream 10660 true Tp57577_TGAC_v2_LG6: 17338475-17349134 Trifolium pratense
Tp57577_TGAC_v2_gene3856 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 17338475-17348474 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313244 5265 Fabidae View MSA
124071880 5270 Rosid View MSA
123745116 5271 Pentapetalae View MSA
122797233 5272 Eudicot View MSA
122051134 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain