Gene : Tp57577_TGAC_v2_gene4121 T. pratense v2
Defline:  (1 of 1) PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  729
Name:  ? Tp57577_TGAC_v2_gene4121 Secondary Identifier:  ? PAC:35973886
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4121 0.5kb upstream 0.5kb upstream 12375 true Tp57577_TGAC_v2_LG6: 5737528-5749902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 5737528-5738027 Trifolium pratense
Tp57577_TGAC_v2_gene4121 0.5kb downstream 0.5kb downstream 12375 true Tp57577_TGAC_v2_LG6: 5738028-5750402 Trifolium pratense
Tp57577_TGAC_v2_gene4121 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 5749903-5750402 Trifolium pratense
Tp57577_TGAC_v2_gene4121 1.0kb upstream 1.0kb upstream 12875 true Tp57577_TGAC_v2_LG6: 5737028-5749902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 5737028-5738027 Trifolium pratense
Tp57577_TGAC_v2_gene4121 1.0kb downstream 1.0kb downstream 12875 true Tp57577_TGAC_v2_LG6: 5738028-5750902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 5749903-5750902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 2.0kb upstream 2.0kb upstream 13875 true Tp57577_TGAC_v2_LG6: 5736028-5749902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 5736028-5738027 Trifolium pratense
Tp57577_TGAC_v2_gene4121 2.0kb downstream 2.0kb downstream 13875 true Tp57577_TGAC_v2_LG6: 5738028-5751902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 5749903-5751902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 5.0kb upstream 5.0kb upstream 16875 true Tp57577_TGAC_v2_LG6: 5733028-5749902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 5733028-5738027 Trifolium pratense
Tp57577_TGAC_v2_gene4121 5.0kb downstream 5.0kb downstream 16875 true Tp57577_TGAC_v2_LG6: 5738028-5754902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 5749903-5754902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 10.0kb upstream 10.0kb upstream 21875 true Tp57577_TGAC_v2_LG6: 5728028-5749902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 5728028-5738027 Trifolium pratense
Tp57577_TGAC_v2_gene4121 10.0kb downstream 10.0kb downstream 21875 true Tp57577_TGAC_v2_LG6: 5738028-5759902 Trifolium pratense
Tp57577_TGAC_v2_gene4121 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 5749903-5759902 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300035 5265 Fabidae View MSA
124062676 5270 Rosid View MSA
123736808 5271 Pentapetalae View MSA
122787445 5272 Eudicot View MSA
122041770 5273 Angiosperm View MSA
121347464 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain