Gene : Tp57577_TGAC_v2_gene4374 T. pratense v2
Defline:  (1 of 1) PF00587//PF07973 - tRNA synthetase class II core domain (G, H, P, S and T) (tRNA-synt_2b) // Threonyl and Alanyl tRNA synthetase second additional domain (tRNA_SAD) Genomic Order:  1712
Name:  ? Tp57577_TGAC_v2_gene4374 Secondary Identifier:  ? PAC:35974797
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4374 0.5kb upstream 0.5kb upstream 17946 true Tp57577_TGAC_v2_LG6: 14409269-14427214 Trifolium pratense
Tp57577_TGAC_v2_gene4374 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 14426715-14427214 Trifolium pratense
Tp57577_TGAC_v2_gene4374 0.5kb downstream 0.5kb downstream 17946 true Tp57577_TGAC_v2_LG6: 14408769-14426714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 14408769-14409268 Trifolium pratense
Tp57577_TGAC_v2_gene4374 1.0kb upstream 1.0kb upstream 18446 true Tp57577_TGAC_v2_LG6: 14409269-14427714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 14426715-14427714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 1.0kb downstream 1.0kb downstream 18446 true Tp57577_TGAC_v2_LG6: 14408269-14426714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 14408269-14409268 Trifolium pratense
Tp57577_TGAC_v2_gene4374 2.0kb upstream 2.0kb upstream 19446 true Tp57577_TGAC_v2_LG6: 14409269-14428714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 14426715-14428714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 2.0kb downstream 2.0kb downstream 19446 true Tp57577_TGAC_v2_LG6: 14407269-14426714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 14407269-14409268 Trifolium pratense
Tp57577_TGAC_v2_gene4374 5.0kb upstream 5.0kb upstream 22446 true Tp57577_TGAC_v2_LG6: 14409269-14431714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 14426715-14431714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 5.0kb downstream 5.0kb downstream 22446 true Tp57577_TGAC_v2_LG6: 14404269-14426714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 14404269-14409268 Trifolium pratense
Tp57577_TGAC_v2_gene4374 10.0kb upstream 10.0kb upstream 27446 true Tp57577_TGAC_v2_LG6: 14409269-14436714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 14426715-14436714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 10.0kb downstream 10.0kb downstream 27446 true Tp57577_TGAC_v2_LG6: 14399269-14426714 Trifolium pratense
Tp57577_TGAC_v2_gene4374 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 14399269-14409268 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302424 5265 Fabidae View MSA
124061778 5270 Rosid View MSA
123740183 5271 Pentapetalae View MSA
122787371 5272 Eudicot View MSA
122045647 5273 Angiosperm View MSA
123429084 5275 Viridiplantae View MSA
121345438 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain