Gene : Tp57577_TGAC_v2_gene4144 T. pratense v2
Defline:  (1 of 1) PTHR13872:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B Genomic Order:  668
Name:  ? Tp57577_TGAC_v2_gene4144 Secondary Identifier:  ? PAC:35976489
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4144 0.5kb upstream 0.5kb upstream 9508 true Tp57577_TGAC_v2_LG6: 5322616-5332123 Trifolium pratense
Tp57577_TGAC_v2_gene4144 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 5331624-5332123 Trifolium pratense
Tp57577_TGAC_v2_gene4144 0.5kb downstream 0.5kb downstream 9508 true Tp57577_TGAC_v2_LG6: 5322116-5331623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 5322116-5322615 Trifolium pratense
Tp57577_TGAC_v2_gene4144 1.0kb upstream 1.0kb upstream 10008 true Tp57577_TGAC_v2_LG6: 5322616-5332623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 5331624-5332623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 1.0kb downstream 1.0kb downstream 10008 true Tp57577_TGAC_v2_LG6: 5321616-5331623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 5321616-5322615 Trifolium pratense
Tp57577_TGAC_v2_gene4144 2.0kb upstream 2.0kb upstream 11008 true Tp57577_TGAC_v2_LG6: 5322616-5333623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 5331624-5333623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 2.0kb downstream 2.0kb downstream 11008 true Tp57577_TGAC_v2_LG6: 5320616-5331623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 5320616-5322615 Trifolium pratense
Tp57577_TGAC_v2_gene4144 5.0kb upstream 5.0kb upstream 14008 true Tp57577_TGAC_v2_LG6: 5322616-5336623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 5331624-5336623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 5.0kb downstream 5.0kb downstream 14008 true Tp57577_TGAC_v2_LG6: 5317616-5331623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 5317616-5322615 Trifolium pratense
Tp57577_TGAC_v2_gene4144 10.0kb upstream 10.0kb upstream 19008 true Tp57577_TGAC_v2_LG6: 5322616-5341623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 5331624-5341623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 10.0kb downstream 10.0kb downstream 19008 true Tp57577_TGAC_v2_LG6: 5312616-5331623 Trifolium pratense
Tp57577_TGAC_v2_gene4144 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 5312616-5322615 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041451 5273 Angiosperm View MSA
122299315 5265 Fabidae View MSA
124062338 5270 Rosid View MSA
123739535 5271 Pentapetalae View MSA
122792930 5272 Eudicot View MSA
121345608 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain