Gene : Tp57577_TGAC_v2_gene39148 T. pratense v2

Defline:  (1 of 1) KOG3102 - Uncharacterized conserved protein Genomic Order:  2138
Name:  ? Tp57577_TGAC_v2_gene39148 Secondary Identifier:  ? PAC:35974299

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39148 0.5kb upstream 0.5kb upstream 6819 true Tp57577_TGAC_v2_LG6: 18367870-18374688 Trifolium pratense
Tp57577_TGAC_v2_gene39148 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 18374189-18374688 Trifolium pratense
Tp57577_TGAC_v2_gene39148 0.5kb downstream 0.5kb downstream 6819 true Tp57577_TGAC_v2_LG6: 18367370-18374188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 18367370-18367869 Trifolium pratense
Tp57577_TGAC_v2_gene39148 1.0kb upstream 1.0kb upstream 7319 true Tp57577_TGAC_v2_LG6: 18367870-18375188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 18374189-18375188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 1.0kb downstream 1.0kb downstream 7319 true Tp57577_TGAC_v2_LG6: 18366870-18374188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 18366870-18367869 Trifolium pratense
Tp57577_TGAC_v2_gene39148 2.0kb upstream 2.0kb upstream 8319 true Tp57577_TGAC_v2_LG6: 18367870-18376188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 18374189-18376188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 2.0kb downstream 2.0kb downstream 8319 true Tp57577_TGAC_v2_LG6: 18365870-18374188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 18365870-18367869 Trifolium pratense
Tp57577_TGAC_v2_gene39148 5.0kb upstream 5.0kb upstream 11319 true Tp57577_TGAC_v2_LG6: 18367870-18379188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 18374189-18379188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 5.0kb downstream 5.0kb downstream 11319 true Tp57577_TGAC_v2_LG6: 18362870-18374188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 18362870-18367869 Trifolium pratense
Tp57577_TGAC_v2_gene39148 10.0kb upstream 10.0kb upstream 16319 true Tp57577_TGAC_v2_LG6: 18367870-18384188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 18374189-18384188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 10.0kb downstream 10.0kb downstream 16319 true Tp57577_TGAC_v2_LG6: 18357870-18374188 Trifolium pratense
Tp57577_TGAC_v2_gene39148 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 18357870-18367869 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300312 5265 Fabidae View MSA
124068859 5270 Rosid View MSA
123738361 5271 Pentapetalae View MSA
122785872 5272 Eudicot View MSA
122050047 5273 Angiosperm View MSA
123429042 5275 Viridiplantae View MSA
121344227 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain