Gene : Tp57577_TGAC_v2_gene4073 T. pratense v2
Defline:  (1 of 3) PTHR33921:SF2 - CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED Genomic Order:  725
Name:  ? Tp57577_TGAC_v2_gene4073 Secondary Identifier:  ? PAC:35975488
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4073 0.5kb upstream 0.5kb upstream 2350 true Tp57577_TGAC_v2_LG6: 5716048-5718397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 5716048-5716547 Trifolium pratense
Tp57577_TGAC_v2_gene4073 0.5kb downstream 0.5kb downstream 2350 true Tp57577_TGAC_v2_LG6: 5716548-5718897 Trifolium pratense
Tp57577_TGAC_v2_gene4073 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 5718398-5718897 Trifolium pratense
Tp57577_TGAC_v2_gene4073 1.0kb upstream 1.0kb upstream 2850 true Tp57577_TGAC_v2_LG6: 5715548-5718397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 5715548-5716547 Trifolium pratense
Tp57577_TGAC_v2_gene4073 1.0kb downstream 1.0kb downstream 2850 true Tp57577_TGAC_v2_LG6: 5716548-5719397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 5718398-5719397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 2.0kb upstream 2.0kb upstream 3850 true Tp57577_TGAC_v2_LG6: 5714548-5718397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 5714548-5716547 Trifolium pratense
Tp57577_TGAC_v2_gene4073 2.0kb downstream 2.0kb downstream 3850 true Tp57577_TGAC_v2_LG6: 5716548-5720397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 5718398-5720397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 5.0kb upstream 5.0kb upstream 6850 true Tp57577_TGAC_v2_LG6: 5711548-5718397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 5711548-5716547 Trifolium pratense
Tp57577_TGAC_v2_gene4073 5.0kb downstream 5.0kb downstream 6850 true Tp57577_TGAC_v2_LG6: 5716548-5723397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 5718398-5723397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 10.0kb upstream 10.0kb upstream 11850 true Tp57577_TGAC_v2_LG6: 5706548-5718397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 5706548-5716547 Trifolium pratense
Tp57577_TGAC_v2_gene4073 10.0kb downstream 10.0kb downstream 11850 true Tp57577_TGAC_v2_LG6: 5716548-5728397 Trifolium pratense
Tp57577_TGAC_v2_gene4073 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 5718398-5728397 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314753 5265 Fabidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain